Protein Model on 8aqt_A_1_B_1 (TEMPLATE: 8aqt )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ACE2_HUMAN) A 1 (A) polymer(polypeptide(L)) [584 aa] Processed angiotensin-converting enzyme 2,Ig gamma-2A chain C region, membrane-bound form :ACE2_MOUSE:GCAM_MOUSE
2 b B 1 (B) polymer(polypeptide(L)) [193 aa] Spike glycoprotein,Fibritin :SPIKE_SARS2:WAC_BPT4 24Q(N) 31K(N) 41Y 82M(S) 353K(H) 354G 355D (identity: 42.9 %/84.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8aqt_A_1 identity=84.5%
queryA        22:EEQAKTFLDKFNHEAEDLFYQSSLASWNYNTNITEENVQNMNNAGDKWSAFLKEQSTLAQMYPLQEIQNLTVKLQLQALQQNGSSVLSEDKSKRLNTILN: 121
                :** *****  ** ***** ****************** * *  *  *****  ***  **   *****    * ******* *** ** ** * ******:
8aqt_A_1      38:EENAKTFLNNFNQEAEDLSYQSSLASWNYNTNITEENAQKMSEAAAKWSAFYEEQSKTAQSFSLQEIQTPIIKRQLQALQQSGSSALSADKNKQLNTILN: 137
SecStr          :TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS  SHHHHHHHHHHHHHHHHHHHHHHHTTT    SS   STHHHHHHHH  TT  S TTHHHHHTTSHH:    
ExpBur          :eeeeeeebeeebebbbeeeeeebebeeeeeeeeeeebeeeeeebeeeeeeeeeebbeebeeeebeeeeeeebeeebeebeeeeebeeeeeeeeebeeeee:    
Contact         :  b      b         b                                        b                                       

queryA       122:TMSTIYSTGKVCNPDNPQECLLLEPGLNEIMANSLDYNERLWAWESWRSEVGKQLRPLYEEYVVLKNEMARANHYEDYGDYWRGDYEVNGVDGYDYSRGQ: 221
                :************** ************ **** * *** ****** ** ************************ * ***********  * *** * * *:
8aqt_A_1     138:TMSTIYSTGKVCNPKNPQECLLLEPGLDEIMATSTDYNSRLWAWEGWRAEVGKQLRPLYEEYVVLKNEMARANNYNDYGDYWRGDYEAEGADGYNYNRNQ: 237
SecStr          :HHHHHHHS     TT  TT   S HHHHHHHTSS  STTTTTTTHHHHHHHTTSHHHHHHHHHHHTHHHHHTSSSS HHHHHHTT    SSTT    TTH:    
ExpBur          :ebeeeeeeeeebeeeeeeeeeeeeeeebeeeebeeeeeeeeebeeeeeeeebeebeeebeebeebebebbeebeeeebbebebbeeebeeeeeeebeeee:    

queryA       222:LIEDVEHTFEEIKPLYEHLHAYVRAKLMNAYPSYISPIGCLPAHLLGDMWGRFWTNLYSLTVPFGQKPNIDVTDAMVDQAWDAQRIFKEAEKFFVSVGLP: 321
                :****** ** ************** ***  ******* ******************** ***** ***********  * *** *** ************:
8aqt_A_1     238:LIEDVERTFAEIKPLYEHLHAYVRRKLMDTYPSYISPTGCLPAHLLGDMWGRFWTNLYPLTVPFAQKPNIDVTDAMMNQGWDAERIFQEAEKFFVSVGLP: 337
SecStr          :HHHHHHHHSSTTTHHHHTHHHHHHHHHHHH TTSS SSS   SSTTS TT S  SSTTTS SSS  S    HHHHHTTTT  HHHHTHHHHHHHHHHT  :    
ExpBur          :eeeeeeeeeeeeeeeeeeeebbeeebeeeeeeeeeeeeeeebebbebeeebeeeeeeeeebbeeeeeeeeeeeeebeeeeeebeebbebbeebbeebeee:    

queryA       322:NMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKGDFRILMCTKVTMDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEGFHEAVGEIMSLSAATPKHLKSI: 421
                : ****** ***** *    * ********** ***** ******** ****************** **********************************:
8aqt_A_1     338:HMTQGFWANSMLTEPADGRKVVCHPTAWDLGHGDFRIKMCTKVTMDNFLTAHHEMGHIQYDMAYARQPFLLRNGANEGFHEAVGEIMSLSAATPKHLKSI: 437
SecStr          :   HHHHH    S  SSS       EEE TTTT  EEE      SHHHHHHHHHHHHHHHHTTSTTSHHHHSS S TTHHHHHHHHHHHHHT HHHHHHT:    
ExpBur          :eeeeebeeeeebeeeeeeeeeeeeeeeeebbeebbbbbbbbebeeebeeebbebbbbbbbbeebbeeeebbeeeebebbeebebbbebebbebeebebee:    
Contact         :                               bbb                                                                  

queryA       422:GLLSPDFQEDNETEINFLLKQALTIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKKWWEMKREIVGVVEPVPHDETYCDPASLFHVSNDYSFIRYYTRTLY: 521
                :***  ***** ******************************** ***** ******************* **************************** *:
8aqt_A_1     438:GLLPSDFQEDSETEINFLLKQALTIVGTLPFTYMLEKWRWMVFRGEIPKEQWMKKWWEMKREIVGVVEPLPHDETYCDPASLFHVSNDYSFIRYYTRTIY: 537
SecStr          :S S TTS   SSHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHTT SS TTSHHHHHHHHHHHHT    SS   S   TTTS TTTTT   STHHHHHHHH:    
ExpBur          :eeeeeeeeeeeebeeeeeeeeeeebeebbeebeeebbebbeeeeeeeeeeeebeeeeeebeeeeeeeeeeeeeeeebeebeeeebbeeeebbeeebebbb:    

queryA       522:QFQFQEALCQAAKHEGPLHKCDISNSTEAGQKLFNMLRLGKSEPWTLALENVVGAKNMNVRPLLNYFEPLFTWLKDQNKNSF: 603
                :*************  * ****************  ** ** ***** ******** ** * ****** *** *** ** ***:
8aqt_A_1     538:QFQFQEALCQAAKYNGSLHKCDISNSTEAGQKLLKMLSLGNSEPWTKALENVVGARNMDVKPLLNYFQPLFDWLKEQNRNSF: 619
SecStr          :HHHHHHHHHTSS   S SS    SS SHHHHHHHHHHTTGGGS HHHHHHHHT  SS   HHHHHHHGGGTHHHHHT  S  :    
ExpBur          :bbbbbeeebeebeeeeeeeebeeeeeeeebeeeeeebeebeeebebebeeeeeebeeeeeeebeebeeeebeeeeeebeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123