#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7ls9_D_1_Y_1

Protein Model on 7ls9_D_1_Y_1 (TEMPLATE: 7ls9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(queryA) D 1 (B) polymer(polypeptide(L)) [1097 aa] Spike glycoprotein :SPIKE_SARS2
2 b Y 1 (R) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 457R 459S 460N 462K 465E (identity: 100.0 %/96.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7ls9_D_1 identity=96.6%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :***********************************************************   **************************************:
7ls9_D_1      14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGXXXTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr          :              EEEE S   B S SS   S EEEEEEEE  TTEEEEEEESS    ---        EE SS EEEEEEESS  EEEEEEESS STT:    
ExpBur          :eeeebeeeeeeeeeebebebbbbbbeeeeebeeebeebeeebbbbeeebbebebeeeee---eebbebbebebeebbbbbbbbeebbbbbbbbbeebbee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :*********************************      ****************************    *****************************:
7ls9_D_1     114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHXXXXXXMESEFRVYSSANNCTFEYVSQPFLMDLEXXXXNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr          :S EEEEEE SS EEEEEEEEEE SS  EEEE  ------ EEEE SEEEEEEEEEEE  S SS    ----   EEEEEEEEEETTEEEEEEEEEE  S :    
ExpBur          :eebbbbbbeeeebbbebbebebbebbbbbbeee------eeeeebbeeeeeeeeeeeeeeebbeebe----eeebbbbbbbbeeeeebebbbeebebeee:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :************************************            ****************************************************:
7ls9_D_1     214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLXXXXXXXXXXXXAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr          :SS  SS   BEEEEEE       EEEEEE   S   ------------  EEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHTSS   SEEE:    
ExpBur          :ebbeeeeebbeeebebebebebeebbbbbbbeeeee------------ebbbbbbebeebbbbbebbeebebeebbbbbbbbbbbbbbeeebbebeebee:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7ls9_D_1     314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr          :E    S     B  B     SB THHHHHT S    TTS EEEEE SSB   STHHHH   SEEEEESS SGGGSS EEEEEEEEEEEE GGGGGGSSTT:    
ExpBur          :ebeeebbeeeeebbbbeeeeeebebeebbeeeebbbbeebeeeebeebbbeeeebeeeeeeeeeebbebeeeebeebbbbebebbbbbbbeebbebbbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7ls9_D_1     414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr          :  SHHHHHT    TT  EEEEEEE TTTTS TT B   EEE   SS   TT        EE SSS  SS  BTTEE SEEE  B TTS GGGS EEEEEE:    
ExpBur          :eebebbbebbebbeebebbbbbbebbeebbeeeebeebebbeeeeeebeeeeebeeeeeeeeeeeebeeeeeeebeebbeebbbeeeeeeeebbbbbbbb:    
Contact         :                                           b bb b  b                                                

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7ls9_D_1     514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr          :EEEESSS  SEE S       TTSEEEEEETTEEEEEEEEE      TT  EEESSSSSEEEEE SSS  EEEEE SS S EEEEE  TTT    EEEEE:    
ExpBur          :bbeebeeebebbbeeeeeebeeeebbebbbbbbeeebbbeeeeeebeeeebbbeeeeeeebbbbbbeeeebbebeebeeeebbbbbbbbeebeebbbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :***************************************************************            *************************:
7ls9_D_1     614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr          :T  GGGHHHHHTTTTS HHHHHTTSSS EEE SSEEEESSEE SS B  SEEEETTEEEEE  ------------   EEEEEB           TTEEE:    
ExpBur          :ebebeebeebbbbeebbeebeebbeeeeebebeebbbbbbeebeeeeeeebebeeebbbbbee------------eeebbbbeebeeeeeeeeeeeeebe:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7ls9_D_1     714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr          :EEEEEEEEEEEEEEE     EEE HHHHTTTT S  HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH SS        S  STT   TTTS  SSSSS:    
ExpBur          :bbbebebebeebbbbbbbbbbbbebeebbbeebeeeeebeeeebeebeebeeebeebbebbbebbeebbbebeeeeeeeeeeebeebebebbbbeeeeee:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :****************************************************************************************************:
7ls9_D_1     814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr          :   HHHHHHHHHS TT STHHHHHTT SS  S   HHHHHHTTSEEE   SS HHHHHHHHHHHHHHHHHHGGGGTTSS     HHHHHHHHHHHHT  H:    
ExpBur          :eebebbbbbbeebeebebebeebbeebbbbeeebeeebbeebebbbbeeeebeeeebbebbbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :************************************************************************  **************************:
7ls9_D_1     914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr          :HHHHHSHHHHHHHHHHHHHHHHHHHHTT    HHHHHHHHHHHHHHHHHHHHHHS  SSS SSHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebeeebeeeeeebeebbebbbebbebbbebbbebeeeeebebeebeebbeeeeeeebeebbbebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7ls9_D_1    1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr          :HHHHHHHHHHHHHHHHHHHTSS    SSSSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEEETTEEEEE SSS   B:    
ExpBur          :bbeebeebbeebbebbeebbbbebeeeebbeeeebbbbbbbbbbbbbbbbbbbbbeeeeeebebbebbbeeeebbeeeeebbbbeeeebbbbbebbeeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
                :**********************************:
7ls9_D_1    1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
SecStr          :  BTTTEEEEEETTSSTT EE   B SHHHHH  :    
ExpBur          :ebbeeebeeeeebeeeeeeeeeebeeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123