#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [1024 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | H 1 (N) | polymer(polypeptide(L)) [214 aa] | Fab 15033-7 light chain | 112S 134Q (identity: 100.0 %/90.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7kxk_A_1 identity=90.6% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 :******************************************************* ************************************: 7kxk_A_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIXXXXXXXXXRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113 SecStr : EEE TT S SEEEEEEEEE TT EEEEEE --------- EEE TT EEEEEE SS EEEEESS SSS: ExpBur :eeeeeebeeeeeeeeeebeebbbbbeeeeeeeeeeeebeebbbbbeeebbbbbbe---------ebbbeeeebeebbbbbbbbeeeebbbbbbbeebeee: Contact : b queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213 :****************************** ************************** ***************************: 7kxk_A_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVXXXXXXXXWMESEFRVYSSANNCTFEYVSQPFLMXXXXXXXXXKNLREFVFKNIDGYFKIYSKHTPINLV: 213 SecStr :S EEEEEE SS EEEEEEEEEE SS BB -------- BGGGTEEEEEEEEEEEEE S --------- EEEEEEEEEETTEEEEEEEEEE S T: ExpBur :ebbbbbbbbeeebbbbbbebebbebbbbbe--------eeeebebbbeeeeeeebeeebeebee---------eebbbbbbbeeeeebbbbeeebebeee: Contact : b queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 :******************************** ***************************************************: 7kxk_A_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHXXXXXXXXXXXXXXXXXAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313 SecStr :TS SS EEEEEEE EEEE B ----------------- EEEEEE EEEEEEEEE TTS EEEEEETTSSHHHHHHHHHT SS SEEE: ExpBur :eebbeebbebeeebebebebebeebbbbbbee-----------------ebbbbbbbeeebbbbebeeebebeebbbeeeeebbbbbbeeeebebeebeb: queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 :****************************************************************************************************: 7kxk_A_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413 SecStr :EEEEEE EEEEE S B HHHHT SS GGG EEEEE SEE SHHHHHH SEEEEESS TTT S EESEEEEEEEEEEGGGGGGSSBT: ExpBur :ebeebeeebeeebebbeeeeeebebeebbebeebebbbbbeeeebeebbbebbebeeeeeeebbebeebeeeeebeeebbebbbbbbbbebebbebbbbe: queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 :****************************************************************************************************: 7kxk_A_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513 SecStr : SHHHHHT B TT EEEEEEE TTTS TT B EEE SS TT EE SSS TT BTTEE SEEE B TTS GGGSEEEEEEE: ExpBur :eeeebbeebbebeeebebbbbbeebeeebbeeebbeebebbeebeeebeeeeeeeeeeebeeeeeebeeeeeeebbebbeebebeeeeeeeebbbbbbbb: queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 :****************************************************************************************************: 7kxk_A_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613 SecStr :EEE SS EE SSEEEEEETTEEEEEEEEE S TT SEEE TTS EEEEE SSS EEEEE SEEEEEEEE TTT EEEET: ExpBur :bbeeeeeeebbebbeeeeeeeeeebbebebeebeeebbbeeeeeebeeeeeebeeeeeeeebbbbbeeeebbbbeebbebbbbbbbbbbeebeeebbbee: queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713 :******* ************************************* *************************: 7kxk_A_1 614:DVNCTEVXXXXXXXXXXXXXXXXXXXSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713 SecStr :TS TTT ------------------- EE TT EEET EEEEEEE SEEEETTEEEE ------------ EEEEE S TTEEE: ExpBur :ebebeee-------------------eeebebeebbbeebeeeeeeeeeebebeeebbbbbee------------eebbbbbeeeeeeeeeeeeeeeeee: queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 :****************************************************************************************************: 7kxk_A_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813 SecStr :EEEEEEEEEEEEEEE EEE HHHHHH S HHHHHHHGGGTTTTHHHHHHHHHHHHHHHHHHHHHH SSS SS STT GGGTS TTSSS: ExpBur :bbeebebebeeebbbbbbebbebebeebbbeeeeebeebbeeeeebbeebeeebeebbeebeebbeebbeebeeebeeeeeeebeebebeebbeeeeeee: queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913 :*** ********** ************************************** ****** **************: 7kxk_A_1 814:KRSPIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQ: 913 SecStr : HHHHHHHTT -------------------------- TTSEEE SS HHHHHHHHHHHHHHHHHTTTTTTSSS HHHHHHHHHHTTT T: ExpBur :ebbebbbbbbeebe--------------------------eeebbeeeeeebeeeebbeebbbbbbbbbbbbebeeeeeeeebebeebbbebbeebebbe: queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013 :**************************** ******************************************* **************************: 7kxk_A_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLI:1013 SecStr :HHHHHTHHHHHHHHHHHHHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbeeeeeebbeebeebbeebeeebeeeeeebbebbebbeebeebbeebeeebeeeeebebbebeebeeebeeeebeebbeebbebbbebbeebbeebee: queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 :****************************************************************************************************: 7kxk_A_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113 SecStr :HHHHHHHHHHHHHHHHHHTTTT STTTTSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EEETTEEEEESSSEEEESSS EEEEETTEEEEE: ExpBur :ebeebeeebeebbebbeebbebbbeeeebbeebebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbbbeeebbbbeeeebebbbeebbeee: queryA 1114:IITTDNTFVSGNCDVVIGIVNNTV:1137 :************************: 7kxk_A_1 1114:IITTDNTFVSGNCDVVIGIVNNTV:1137 SecStr : TTTEEEES TTT TT EE : ExpBur :ebeeeebeeeeebeebeeeeebee: |