#WARNING:no index is registered index "YP_009724390.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724390.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [1030 aa] | Spike glycoprotein :SPIKE_SARS2 | |
2 | b | V 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 603N (identity: 100.0 %/92.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6zp0_A_1 identity=92.2% |
queryA 27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126 :******************************************* ***********************************************: 6zp0_A_1 18:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 117 SecStr : EEE S B SSS SEEEEEEEEE TT EEEEEE ---------- EE S EEEEEEESS EEEEEEESS SSSS EEEEEE SS E: ExpBur :eebebebbbbbbbeeeeeeeeeeebeebbbbbeeebbbbebee----------ebeebebeebbbbbbbbbbbbbbbbbbbeebebeebbbbbbeebeee: queryA 127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226 :***************** **************************************************************************: 6zp0_A_1 118:VIKVCEFQFCNDPFLGVXXXXXXXXXMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 217 SecStr :EEEEE EEEEEEE --------- EEEEE S EEEE S SS EEEEEEEEEETTEEEEEEEEEE SSS SS BEEE: ExpBur :ebebbebebbeebbbbe---------eeeeeebeeeeeeeeeeeebeeeeeebeeeeeebebbbbbbbbeeeeebbbbbeeeebeeeebbbeeeebbeee: queryA 227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326 :******************* *******************************************************************: 6zp0_A_1 218:VDLPIGINITRFQTLLALHXXXXXXXXXXXXXXAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 317 SecStr :EEEE EEEEEE -------------- EEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHTSS SEEEEEEEEE SSEE: ExpBur :eebebebebeebbbbbbee--------------ebebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeebebeebeeebeebeeeeeeeb: queryA 327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426 :****************************************************************************************************: 6zp0_A_1 318:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 417 SecStr :EE B HHHHS S BGGG EEEEE SEE HHHHHHSTT SEEEEESS TTTTTT EES EEEEEEEEEGGGGGGSSTT SHHHHHT : ExpBur :ebbbeeeeebebeebbeeeebebbeebeeeebbebbbebeebeeeeeeeeeebeebeeeebbeebbbebebbbbbbebebeebbbbeeeeebbbebbebb: queryA 427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526 :****************************************************************************************************: 6zp0_A_1 418:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 517 SecStr :TT EEEEEEE TTTT TT B EEE SS TT EESSSS SS BTTEE SEEE B TTS GGGSEEEEEEEEE SSS EE : ExpBur :eebebbbbbbebbeebbeeebbeebebbeeeeeebeeeeebeeeebeeeeeeebeeeeeeebeebbebbebeeeeeebebbbbbbbbbbeeeeeebbbbb: queryA 527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626 :********************************************************************************************** : 6zp0_A_1 518:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVXXXXXX: 617 SecStr :S SSEEEEEETTEEEEEEEEE TT EEE TTS EEEEE SSS EEEEE EEEEEEEE TTT EEEEET TTT ------: ExpBur :eeeeeeeeeeebbebbbbeeeeebebeebeeebeeeebebeeeeeebebbbbeeeeebbbbeebeebbbbbbbbbeeebeebbbbeeebeeeee------: Contact : b queryA 627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726 : ************************************ **************************************: 6zp0_A_1 618:XXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXX----XXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 713 SecStr :-------------- EEEETTEEEES EE SS B SEEEETTEEEEEE ------------ EEEEEEB S TTEEEEEEEEEEEEEEEE: ExpBur :--------------eebebebbbbeebeebeeeeeeebebeeebbbbbee------------eebbbbbeeeeeeeeeeeeeeeeeebbeebebebeeeb: queryA 727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826 :****************************************************************************************************: 6zp0_A_1 714:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 813 SecStr :EE EEEE HHHHHTSS HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH SS SS STT TTTS TTSSS HHHHHHHTT : ExpBur :bbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbbebbeebbebbeeebeeeeeeebeebebeebbeeeeeeeebbebbbbbbebb: queryA 827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926 :* *************************************************************************: 6zp0_A_1 814:TXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 913 SecStr : -------------------------- TTSEEEE SS HHHHHHHHHHHHHHHHHHTTHHHHSS HHHHHHHHHHTTT THHHHHTHHHHHHH: ExpBur :e--------------------------eeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeebebbebbbebbeebebeeebbeeeeeebbeb: queryA 927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026 :****************************************************************************************************: 6zp0_A_1 914:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1013 SecStr :HHHHHHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :beebbeebeeebeeeeeebeebbebbeebeebbeebeeebeeeeebebbebeebeeeeeeeebbebbeebbebbbebbeebbeebeebbeebeebbeebb: queryA 1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126 :****************************************************************************************************: 6zp0_A_1 1014:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1113 SecStr :HHHHHHTSS STTTTSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSEEEEESSSEEEE SS EEEE TTS EE BTTTEEEEEET: ExpBur :ebbeebbbbbbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbebeebbbbbeeeebbbbbeebbbeeebbeeebeeeeeb: queryA 1127:DVVIGIVNNTVYDPLQPELDS:1147 :*********************: 6zp0_A_1 1114:DVVIGIVNNTVYDPLQPELDS:1134 SecStr :TTSTT EE B TTHHHHH : ExpBur :eeeeeeeeeebeeeeeeeeee: |