Protein Model on 6msl_A_1_B_1
(TEMPLATE: 
6msl
)Protein Model on 6msl_A_1_B_1
(TEMPLATE: 6msl
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [924 aa] | Integrin alpha-V :ITAV_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [690 aa] | Integrin beta-3 :ITB3_HUMAN | 349L(F) 351S(Q) 354I(F) 368V(P) 373W 403Y 406Y 426R 428Q(R) 429H(T) 455Q 456I(M) 457G(A) 459Y 462G(F) 483P 484L 486Y(M) 488E(R) 490R(E) 516Y(F) 520R 545L(Y) 583R(Y) 679G(K) 680H(L) 683R(K) 717C(E) 718V(F) 719Q(R) 723S(T) 830R(I) 835L(R) (identity: 27.3 %/29.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6msl_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425
:** * * * * * * * * * * * **** * ** *:
6msl_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244
SecStr :S STTTTTT TTSEEEE TTSEEEEEETTHHHHTBEEEEEEHHHHHHT TT SS TT EE GGG S BTSEEEEE SSSSS EEEEEET:
ExpBur :eebebebbbebbbbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeeebebeeebebeeeeeeeeebebbebbbbbebeeeeeebbbbbbb:
Contact : b b b b b bb b b
queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518
:* * * * * * * *** * * ****** * * * * * * * :
6msl_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337
SecStr :TTGGGT EEEEE ----TTT EEEEEE SSTTS TTSEEEEE SSSS EEE-EEETT EEE TTS EEE EEEEEEE SSS EEEEEEE SSTT--:
ExpBur :ebeeebbbbbbbb----beebeeeeebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebebebeeeeeebbbbbbbbbbeeeeebeeeebebeeee--:
Contact :b bb bbb b b bb b bbbbb b b b
queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605
: *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** :
6msl_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430
SecStr :S TTSEEEEEE SS SSS EEEEEETT SGGG EEEEEEEETTEE SS SEEEE ------- SSS TTSEEEEEE TT SSS EEEEEETTTT:
ExpBur :bebbbbbbebbbbbeeeeebbbbbbbbbbeeebbbbbbbbbeeebbbeeebbebeb-------eeeeeeeebbbbebbebebebbebebbbbbbbbbbbb:
Contact : b b bb b b
queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697
: * *** * ** * * * * * * ** ** ** * * :
6msl_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525
SecStr :EEEEE B EEEEEEEEEES SEE SS B TTT B EEEEEEEEEEE SSS S-----EEEEEEEEEESTT SSS EEETTT SSEEEEEE:
ExpBur :bbbbbbbbbbbebeeebebeeeebebeeeebebeeeeeebbebebebbbebebeeebee-----ebebebebbbbeebeeeeeebbbbbeeeebeeeeeb:
Contact : bb b b
queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
: * * * * ** * * * * *** * * * **** * * ** :
6msl_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614
SecStr :EEEBSS B EEEE TTTSS SSS EEEEEEEEE-------- S S SSS EE SSS SEEEEEEEE S-- TTTTS EEEEEE- SS:
ExpBur :ebeeeeeeeeeebebbbeeeeebeeeeebbbbbbebeb--------eeeeebeeeebebebeeeeeeeeeeebbbbee--beeeebbebebebebe-bee:
Contact : bbb b
queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
: * * * ** * * * * ** * * * * *** * * :
6msl_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709
SecStr : EEETTS EEEEEEEEEEE SS BTTEEEEEE SS EEEEE- S SSS EEEE TT--- EEEEEEESSB- TTEEEEEEEEEEE SSSS :
ExpBur :eebebeeebebbbebebbbeeebbbebebbbebeebbebebb-beeeeebeebeeeeeeeee---eeebbbebeeeb-eeeeeeebbbebebebeeeeee:
Contact : b b
queryA 891:SVELHANVTCNN: 902
:** *:
6msl_A_1 710:SVKFDLQIQSSN: 721
SecStr : EE EEEEE S :
ExpBur :ebebebebebeb:
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[assembly_id:1]
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