Protein Model on 5es4_C_1_D_1
(TEMPLATE: 
5es4
)Protein Model on 5es4_C_1_D_1
(TEMPLATE: 5es4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [884 aa] | Integrin alpha-X :ITAX_HUMAN | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [674 aa] | Integrin beta-2 :ITB2_HUMAN | 47Y(D) 62G(Q) 94Y(S) 97M(L) 114G(T) 116S(H) 120D(G) 121Q(R) 122N 123T(M) 124Y 125L 345F 349L(M) 351S(Q) 354I(F) 368V 373W 401A(D) 403Y 406Y 425P 426R 428Q 429H 454T 456I 457G 459Y 484L(H) 486Y 487G(E) 503G(R) 505E(W) 518L(W) 564Q(S) 580W(Y) 680H(G) 681R 682T(L) 723S(T) 728S(R) 830R 831K(Y) 836K(Q) 843V(L) 844S(T) 865S(H) 866P(L) 867I 869K(R) 924N(Y) 928Q(S) 935L(K) 1070S(Q) (identity: 36.4 %/37.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5es4_C_1 identity=37.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * :
5es4_C_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98
SecStr : SSS EEEE SSS--TTSEEEEETTTEEEEE TT BTTB B EEEEETTTS EEE TTSBS BTSEEEEETTTTEEEEEEEEEEEE S:
ExpBur :bbbbeeeebebebebeb--bbbbbbbbeeeebbbbbbeeeeeeebbbbbbebbeeeeeeeebeeeebeebeebebbebbbebeeeeebbbbbbebeeebe:
Contact : b b b b b b b
queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
: * ** *** * :
5es4_C_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr :S EEEEEEEEEE----------------------------------------------------------------------------------------:
ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------:
Contact :bbbbb
queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
: :
5es4_C_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342
: :
5es4_C_1 111:----------------------GPTQLTQRLPVSRQECPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188
SecStr :----------------------ETTEEEEEESSS -----------------------------------------------------------:
ExpBur :----------------------beeeeeeebbeeeeeeeee-----------------------------------------------------------:
queryA -1:----------------------------------------------------------------------------------------------------: -1
: :
5es4_C_1 189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405
: ** * * ** * **** * ** *** * ***:
5es4_C_1 289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387
SecStr :------------------------------------- SSTT TTSEEE TTS EEEESSHHHHTBEEEE TTS- EEE TT SS TTS BT:
ExpBur :-------------------------------------eeeeebebbbbebbbbbeebbbbbbbbbebebbbbbbbeeee-eeeebebeeeeeebeebebb:
Contact : b b b b b b b b
queryA 406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQLG: 503
:* * * * ******* * * * * ********* ** **** ** * * ***** * *** * * :
5es4_C_1 388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484
SecStr :SE-EEEE SS EEEEEETTGGGTBEEEEEE--EETTEEEEEEEEE SSTT BTSEEEEE SSSSSS EEEEEEEEEEETTEEEEEEEEE SSS :
ExpBur :eb-beebeeeeebbbbbbbbebeebbbbbbbb--beeeebeebbebebeeeebebbbbbbbbebeeeebbebbbbbbbebeeeebbbbbbbbbebebebe:
Contact :b bb bb b bb b b bb b
queryA 504:FEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVA: 600
: * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * *:
5es4_C_1 485:WWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLA: 584
SecStr : EEE SSEEEEEETSEEEEEE SSSSSS EEEEEETTHHHHTBEEEEEEEETTTEE SS S EEEHHHH TT SBTSEEEEEE SSSSSS EEE:
ExpBur :bebeeebebeeebeebbbbebbbebeebbbeebbbbbbbbbbbeeeebbbbbbbbeeeeebbeeeeebbbbeeeeeebeebbebbbbebbbbebebbbbb:
Contact : b b b b
queryA 601:VGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRR: 697
:*** * * *** * * ***** ** * ** * * * * * ** * * * * *:
5es4_C_1 585:VGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSR: 683
SecStr :EE SSEEEEEE EE EEEEEEESSSB GGGTS S STT - EEEEEEEEEE S S SSSSS EEEEEEEEESTT SS EETTTSSSEEEE:
ExpBur :bbbeebbbbbbbebbbbbbeeeebeeeebeeebbeeeeeeeee-eeebebebbbebeeeeeebeeebbeebebbbebbbbeeeeeebbebeeeeeeebee:
Contact : bbb
queryA 698:NIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
: * * * ** * ** *** * ** *** * * ******* * * ** *** :
5es4_C_1 684:VRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGL: 771
SecStr :EEEE SS EEEEEEEEE SS S SSS EEEEEEEEE------------ S SSTT EE TTS EEEEEE B SS EEEEEE SS :
ExpBur :eeebbeeeeeeebebbbeeebebeeebbebebebeb------------ebeebeeeebbebbbbeeeeeeeebebbbebeeeeeeeeeeebbbebebeee:
Contact : b b b
queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSS: 887
: * * * * ** * * *** * * * * * * ** ** * * :
5es4_C_1 772:KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAV: 870
SecStr : SEEETTB EEEEEEEEEE SS EES EEEEEEETTEEEE SS SS EEEEEE SSS-SEEEEEEE S EE TT EEEEEEEEEE TT :
ExpBur :eebbbeeeeebebebebebeeebbebbebbbebbeebebeeeeeeeeeeeebebebeeeeeeeeee-eeebbebebbeeebeeeeebebbbbbebeeebe:
Contact : bb b bbb bbb b
queryA 888:WGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---: 972
: ** * *** * * ** * * * * * * * * * *** * * * *** :
5es4_C_1 871:LGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMD: 966
SecStr : SEEEEEEEEE TT ---- SS EEEEEEEEEEE EEEEE S GGG S EEEEEEEEEEEE SSS EEEEEEEEEEEEETTEESEEE:
ExpBur :beeebebbbebebbbee----eeeeeeeeeeebebebbbbbbbeebeeebeebebeeeeeeeeeebebebebbbebeeebebbbbbbbbbebeeeebbee:
Contact : b b b b
queryA 973:VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFH:1066
:* * * * * ** * * * *** * * * * * * * * * * * :
5es4_C_1 967:VEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQ:1062
SecStr :EEEE --SS EEEEEE HHHHHHHS -EE TTTSEEEEEEEEEEEE TT EEEEEEEEEEESSGGGGGT S -EEEEEEEEE TTTEEE:
ExpBur :beeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebeeebbbbeebebebeebbebbbbbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeebeb:
queryA 1067:LYGSNA:1072
:* * *:
5es4_C_1 1063:LPGQEA:1068
SecStr : SSTTG:
ExpBur :eeeeee:
Contact : b
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[assembly_id:2]
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