[pdbjlvh2]Protein Model on 4wk0_A_1_B

Protein Model on 4wk0_A_1_B_1 (TEMPLATE: 4wk0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ITAL_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [449 aa]	Integrin alpha-5 :ITA5_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [427 aa]	Integrin beta-1 :ITB1_HUMAN	354I(F) 373W 403Y 406Y 426R(K) 430M(Y) 456I(M) 457G(A) 459Y 462G(Y) 484L 486Y(M) 490R(E) 518L(F) 520R 545L(F) 580W(F) (identity: 35.3 %/35.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4wk0_A_1 identity=35.3%

queryA       353:GISADLSR-GHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRA-------------GYLGYTVTWLP-SRQKTSLLASGAPRYQ-HMGRVLLF: 436
                :* **     *  * *  *   * *  *              * *   *                **** *     *   *     * *      * *   :
4wk0_A_1     167:GFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQIAESYY-PEYLINLVQGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDFVAGVPKGNLTYGYVTIL: 265
SecStr          :TSEEEE TT  EEEEETTHHHHTBEEEEE HHHHHHT  -TTS S   TT EE     GGG S  BTSSEEEE  SSSSS EEEEEETTTTTTT EEEEE:    
ExpBur          :bebbbbbeebbbbbbbbbbbeebbbbbbbbbeebbeeee-eeebbbebeebeebeeeeeeeeebebbbbbbbbbbeeeeebbbbbbbbebeeeebbbbbb:    
Contact         : b                   b                                        b b  b                    b    b      

queryA       437:QEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTD: 530
                :     *          * *  ****      **  **   **  ****          *  ***  *     * *    *        ****   * * *:
4wk0_A_1     266:N----GSDIRSLYNFSGEQMASYFGYAVAATDVNGDGLDDLL-VGAPLLMDRTPDGRPQEVGRVYVYLQHPAGIEPTPTLTLTGHDEFGRFGSSLTPLGD: 360
SecStr          : ----TTT  EEEEEE SSTTS TTSEEEEE SSSSS  EEE-EEETT EEE TTS EEE  EEEEE EETTEE SS SEEEE  STT  TTSEEEEEE :    
ExpBur          :b----beebeeeeebebeeeebbbbebbbbbbbbeeeeebbb-bbbbebeeebeeeeebbbbebbbbbbeeebbeeeeeeebbbeeeebebbbbbbebeb:    
Contact         :                   bb b  b                     b b    bbbb b                           b b          

queryA       531:INGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI-QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVV: 616
                :   **  *** ***      ** *  * *  ***   ***        *     **    *  ** * *  *  **        *   ****:
4wk0_A_1     361:LDQDGYNDVAIGAPFGGETQQGVVFVFPGGPGGLGSKPSQVLQPLWAASHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKAVVYRGRPVV: 452
SecStr          :SS SSS EEEEEETT STTSS EEEEE   TTSS SS SEEE  SS   SS   TTSEEEEEE SSSSSS EEEEEEGGGTEEEEE B    :    
ExpBur          :bbeeeeebbbbbbbebbeeebbbbbbbebbeebbeeeeebebebebeeeeeebebbebbebeeebeeeebbbbbbbbbbebebbbbebeeee:    
Contact         :              b                                    b b                       b

Protein Model on 4wk0_A_1_B_1 (TEMPLATE: 4wk0 )

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