Protein Model on 4mmx_A_1_B_1
(TEMPLATE: 
4mmx
)Protein Model on 4mmx_A_1_B_1
(TEMPLATE: 4mmx
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [924 aa] | Integrin alpha-V :ITAV_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [690 aa] | Integrin beta-3 :ITB3_HUMAN | 349L(F) 351S(Q) 354I(F) 368V(P) 373W 403Y 406Y 426R 428Q(R) 429H(T) 456I(M) 457G(A) 459Y 462G(F) 483P 484L 488E(R) 490R(E) 516Y(F) 520R 545L(Y) 583R(Y) 679G(K) 680H(L) 681R(K) 683R(K) 684R 719Q(R) 721L(K) 723S(T) 828S(D) 829F 830R(I) 835L(R) 842P(R) 847E(F) (identity: 27.8 %/29.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4mmx_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425
:** * * * * * * * * * * * **** * ** *:
4mmx_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244
SecStr :SS TTTTTTT TTSEEEE TTSEEEEEES HHHHTBEEEEEEHHHHHHT TT SS TT EE GGGTT BTSEEEEE SSSSS EEEEEET:
ExpBur :eebebebbbebebbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeeebebeeebebeeeeeeeeebebbebbbbbebeeeeebbbbbbbb:
Contact : b b b b b bb b b
queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518
:* * * * * * * *** * * ****** * * * * * * * :
4mmx_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337
SecStr :TTTTTTBEEEEE ----SSSS EEEEEE SSTTS BTSEEEEE SSSSSS EEE-EEETT EEE TT EEE EEEEEE SSS EEEEEE SSTT--:
ExpBur :ebeebbbbbbbbb----beebeeeeebebebeebbbbbbbbebbbbeeeebbbb-bbbbebebeeeeeeeebbbbbbbbbbeeebebeeeebebeeee--:
Contact :b bb bb b b bb b bbb b b b
queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605
: *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** :
4mmx_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430
SecStr :S TTSEEEEEE SS SSS EEEEEETT SGGG EEEEE EETTEE S SEEEE ------- SSS SSSEEEEEE SS SSS EEEEEETTTT:
ExpBur :bebbbbbbebbbbbeeeeebbbbbbbbbbeeeebbbbbbbbeeebbbeeebbebeb-------eeeeeeeebbbbebbebeeebbebebbbbbbbbbbbb:
Contact : b b bb b b
queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697
: * *** * ** * * * * * * ** ** ** * * :
4mmx_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525
SecStr :EEEEEEE BEEEEEEEETT EE TT SSS EEEEEEEEEEEE SSS S----- EEEEEEEES TTS SSS EEETTT SSEEEEEE:
ExpBur :ebbbbbbbbbbebebebebeeeebebeeeeebebeeeeebbbbebebbbebeeeeeeee-----ebebebebebbeebeeeeeebbbbbeeeeeeeeeeb:
Contact : bbb bbb b
queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
: * * * * ** * * * * *** * * * **** * * ** :
4mmx_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614
SecStr :EE STT EEEEEEEEE GGGS SS EEEEEEE -------- S SSS B SS SEEEEEEEE S-- TTTTS EEEEEE- S:
ExpBur :ebeeeeeeebeebebbbbeeeebeeeeebbbbbbebeb--------eeeeeeeeeebebebeeeeeeeeeeebbbeee--beeeeebebebebebe-eee:
Contact : b b b
queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
: * * * ** * * * * ** * * * * *** * * :
4mmx_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709
SecStr : EEESSS EEEEEEEEEEE SS BTTEEEEEE TT EEEEE- S SSS EEEEEETT---EEEEEEEEESSB- TTEEEEEEEEEEE SSS :
ExpBur :eebebbeebebbbebebbbebebbbebebbbebeebbebeeb-beeeeebbeeebeeeeeee---eeebbbebeeeb-eeeeeeebbbebbbeeeeeeee:
Contact : bbb b b b
queryA 891:SVELHANVTCNN: 902
:** *:
4mmx_A_1 710:SVKFDLQIQSSN: 721
SecStr :EEEEEEEEE S :
ExpBur :ebebebebebeb:
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[assembly_id:1]
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