Protein Model on 3k71_A_1_B_1
(TEMPLATE: 
3k71
)Protein Model on 3k71_A_1_B_1
(TEMPLATE: 3k71
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [880 aa] | Integrin alpha-X :ITAX_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [673 aa] | Integrin beta-2 :ITB2_HUMAN | 47Y(D) 62G(Q) 97M(L) 114G(T) 116S(H) 120D(G) 121Q(R) 122N 123T(M) 125L 349L(M) 351S(Q) 354I(F) 373W 401A(D) 403Y 406Y 426R 429H 455Q 456I 457G 459Y 484L(H) 486Y 490R 502L(R) 503G(R) 505E(W) 507V(D) 518L(W) 520R 580W(Y) 680H(G) 681R 719Q(E) 722I(V) 723S(T) 728S(R) 831K(Y) 832V 833E(A) 843V(L) 865S(H) 867I 869K(R) 924N(Y) 935L(K) 936Y 937V(L) (identity: 36.0 %/37.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3k71_A_1 identity=37.4% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * :
3k71_A_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98
SecStr : B SSS EEE SS-- SSEEEE STTEEEEE TT TTT EEEEETTTTEEEE TTS S TTSEEEEETTTTEEEEEETT EE S:
ExpBur :bbbbeeeebebeeebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbebebebe:
Contact : b b b b b b
queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
: * ** *** * :
3k71_A_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr :S EE EEEEE----------------------------------------------------------------------------------------:
ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------:
Contact :bbb b
queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
: :
3k71_A_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 321:KDLFTELQKKIYVIEGTSKQDLTSFN--------------------------------------------------------------------------: 346
: :
3k71_A_1 111:--------------------------GPTQLTQRLPVSRQECPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 184
SecStr :--------------------------SSS B S S ---------------------------------------------------------:
ExpBur :--------------------------eeeeeeeebeeeeeeee---------------------------------------------------------:
queryA -1:----------------------------------------------------------------------------------------------------: -1
: :
3k71_A_1 185:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 284
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 347:---------------------------------------------MELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRA: 401
: * * ** * **** * ** *** * :
3k71_A_1 285:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRD: 383
SecStr :-------------------------------------------- SB TTSSB TT EEEES STTTTBEEEE SSS- B SS S:
ExpBur :--------------------------------------------eeeebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebee:
Contact : b b b b b
queryA 402:GYLGYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQR: 499
: **** * * * ******* * * * * ********* ** **** ** * * ***** * *** * *:
3k71_A_1 384:SYLGYS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPR: 480
SecStr : BTSS-EE SSS EEEEEETTGGGT EEEEEE-- TTT EEEEE SSTTS TTS EEEE SSSSSS EEEEE SS SS B EEEEE S:
ExpBur :bebbeb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebeeeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbee:
Contact : b b b b bbb b b b b
queryA 500:RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGL: 596
: * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** ***:
3k71_A_1 481:GWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGL: 580
SecStr :STT S SS S SS BTSEEEEEE SSSSS EEEEE TTTTTS BEEEEEB SSS B SS SB BTTSS S SSEEEEEEEEE S SSS:
ExpBur :eeeebebebebebeeeeeebebbebbbebbebbbeeebbbbbbbbbbeeeebbbbbbbbeeeebbeeeeebebbbeeeeeebeebbbbbebebebbebeb:
Contact : bb b b b b b
queryA 597:ADVAVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE: 694
: * **** * * *** * * ***** ** * ** * * * * * ** * * * :
3k71_A_1 581:VDLAVGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNR: 679
SecStr : EEEEEESS EEEEEB B EEEEEEESS S STTTS SSS - EEEEEEEEEEE TTT SSTTTS EEEEEEEEESTTSSS EETTT SS:
ExpBur :bbbbbbbeebbbbbbbbbbbebeeeeebeeeebeeebbeeeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeee:
Contact : bb
queryA 695:-LRRNIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFS: 786
: * * * * * ** * ** *** * ** *** * * ******* * * ** ***:
3k71_A_1 680:SLSRVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFS: 767
SecStr :EEEEEEEE SS EEEEEEEE S S SS EEEEEEE ------------ SSTTS B SS EEEEEE SSS EEEE:
ExpBur :ebeeeeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebbbeeeeeeeeebebbbeebbeeeeeeeeebbbebe:
Contact : b bb b b
queryA 787:PARSRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTL: 883
: * * * * ** * * *** * * * * * * ** ** * * :
3k71_A_1 768:FPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVS: 866
SecStr : SS S EESS EEEEEEEE SS BSS EEEEEEETTEEEE SS S EEEEEE SSS-SEEEEEEE TTS B TT EEEEEEEEE :
ExpBur :beeeeebbbeeeeebebebebebeebebbbbebbbebbebbebeeeeeeeeeeeebebebebeeeeeeee-eeeebebebeeeebeeeeeeebbbbbebe:
Contact : bbb bb b b b
queryA 884:VNSSWGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEA: 971
: ** * *** * * ** * * * * * * * * * *** * * * **:
3k71_A_1 867:PKAVLGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEA: 962
SecStr :TT SEEEEEEEEEBTTB ---- SSS EEEE EEEE EEEEE S S SS EEEEEEEEE SSS EEEEEE STT :
ExpBur :eebebeeebebbbebbbbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeeeeeeeeeeebebebebebebeeebebbbbbbbbbebeeee:
Contact : b bbb
queryA 972:V---VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSS:1062
:* * * * * * ** * * * *** * * * * * * * * * * *:
3k71_A_1 963:VWMDVEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTS:1058
SecStr :SB S EEE T--TS EEEEEE HHHHHHH -EE TTTS EEEEEEEES TT EEEEEE B SGGGTTTT SS -EEEEEEEEE TT:
ExpBur :bbeebeeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbebbebebebeebebeeebbbbbebebbbbbbeebeeeeb-bbbbbbebebeee:
queryA 1063:KHFHLYGSNA:1072
: * * *:
3k71_A_1 1059:VYSQLPGQEA:1068
SecStr :TEEESSS G:
ExpBur :eebbeeeeee:
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[assembly_id:1]
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