Protein Model on 3k6s_E_1_G_1
(TEMPLATE: 
3k6s
)Protein Model on 3k6s_E_1_G_1
(TEMPLATE: 3k6s
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | E 1 (E) | polymer(polypeptide(L)) [884 aa] | Integrin alpha-X :ITAX_HUMAN | |
| 2 | b | G 1 (G) | polymer(polypeptide(L)) [885 aa] | Integrin alpha-X :ITAX_HUMAN | 635E 639S(Q) 773E(A) 774D 775K(H) 776K(I) 778E(Q) 779A(D) 780N 790S(L) 791R(K) 808S(W) 890D 891S(R) 910D(R) 911N(T) 912S 914T 915T 916I(F) 917I(L) 918P 920L(K) 963D(N) 965N(W) 969L(Q) 993E(A) 994P 995P 1013C(S) 1054S(V) 1056S(E) 1058S(T) 1059F 1060N(D) 1061S(T) 1062S 1063K(V) (identity: 31.6 %/37.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3k6s_E_1 identity=37.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * :
3k6s_E_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98
SecStr : B SSS EEE SS-- SSEEEE STTEEEEE TT TTT EEEEETTTTEEEE SSS S TTSEEEEETTTTEEEEEETT EE S:
ExpBur :bbbbeeeebebeeebeb--bbebbbbbeeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbebebebe:
queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
: * ** *** * :
3k6s_E_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr :S EE EEEEE----------------------------------------------------------------------------------------:
ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------:
queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
: :
3k6s_E_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 321:KDLFTELQKKIYVIEGTSKQDLT-----------------------------------------------------------------------------: 343
: :
3k6s_E_1 111:-----------------------GPTQLTQRLPVSRQECPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 187
SecStr :-----------------------SSS B S -----------------------------------------------------------:
ExpBur :-----------------------eeeeeeeebeeeeeeeee-----------------------------------------------------------:
queryA -1:----------------------------------------------------------------------------------------------------: -1
: :
3k6s_E_1 188:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 287
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 344:---------------------------------------SFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYL: 404
: ** * * ** * **** * ** *** * **:
3k6s_E_1 288:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYL: 386
SecStr :--------------------------------------- SSSB TTSSEE TT EEEES STTTTBEEEE SSS- EEE SS S B:
ExpBur :---------------------------------------eeeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebeb:
queryA 405:GYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQL: 502
:** * * * ******* * * * * ********* ** **** ** * * ***** * *** * * :
3k6s_E_1 387:GYS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWR: 483
SecStr :TSS-EE SSS EEEEEETTGGGT EEEEEE-- TTT EEEEE SSTTS TTS EEEE SSSSSS EEEEE SS SS B EEEEE SSTT:
ExpBur :beb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebeeeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbeeeee:
queryA 503:GFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADV: 599
: * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * :
3k6s_E_1 484:RWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDL: 583
SecStr : S SS S SS BTS EEEEE SSSSS EEEEE TTTTTS BEEEEEB SSS B SS SB BTTSS TT SSEEEEEEE S SSS EE:
ExpBur :ebebeeebebeeeeeebebbebbbebeebbbeeebbbbbbbbbbeeeebbbbbbbbeeeebbeeeeebebbbeeebeebeebbbbbebeeebbebebbbb:
queryA 600:AVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LR: 696
:**** * * *** * * ***** ** * ** * * * * * ** * * * * :
3k6s_E_1 584:AVGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLS: 682
SecStr :EEEESS EEEEEB B EEEEEEESS S STTSS SSS - EEEEEEEEEEE TTT SSTTTS EEEEEEEEESTTSSS EETTT SSEEE:
ExpBur :bbbbeebbbbbbbbbbbebbeebebeeeebeeebbeeeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeebe:
Contact : b b
queryA 697:RNIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPAR: 789
:* * * * ** * ** *** * ** *** * * ******* * * ** *** :
3k6s_E_1 683:RVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPG: 770
SecStr :EEEEE SS EEEEEEEEE S S SS EEEEEEE ------------ SSSSS B SS EEEEE SSS EEEE TT:
ExpBur :eeeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebbbeeeeeeeeebebbbeebbeeeeeeeeebbbebebee:
Contact : bbbb bbb
queryA 790:SRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNS: 886
: * * * * ** * * *** * * * * * * ** ** * * :
3k6s_E_1 771:LKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKA: 869
SecStr : S EESS EEEEEEEE SS BSS EEEEEE TTEEEE SS SS EEEEEE SSS-S EEEEEE TTS B TT EEEEEEEEE TT :
ExpBur :eeebbbeeeeebebebebebeeeebbbbebbbebbebbebeeeeeeeeeeeebeeebebeeeeeeee-eeeebebebeeeebeeeeeeebebbbebeeeb:
Contact :bb b
queryA 887:SWGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV--: 972
: ** * *** * * ** * * * * * * * * * *** * * * *** :
3k6s_E_1 870:VLGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWM: 965
SecStr : SEEEEEEEEEBTTB ---- SSS EEEE EEEE EEEE S S SS EEEEEEEE SSS EEEEEEEE STT SB :
ExpBur :ebeeebebbbebbbbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeebeeeeeeeebebebebebebeeebebbbbbebbbebeeeebbe:
Contact : bb bbb bbbbbbbb b b b b
queryA 973:-VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHF:1065
: * * * * * ** * * * *** * * * * * * * * * * * :
3k6s_E_1 966:DVEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYS:1061
SecStr :S EEE T--TS EEEEEE HHHHHHH -EE TTTS EEEEEEEEEEE TT EEEEEE B SGGGGTTT SSE-EEEEEEEEE TTTEE:
ExpBur :ebeeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbbbbebebebeebebeeebbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeeb:
Contact : bbb b b b bbbbbb
queryA 1066:HLYGSNA:1072
: * * *:
3k6s_E_1 1062:QLPGQEA:1068
SecStr :ESSS :
ExpBur :beeeeee:
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[assembly_id:5]
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