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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AP3A_SARS) | B 1 (B) | polymer(polypeptide(L)) [191 aa] | ORF3a protein :AP3A_SARS2 | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [191 aa] | ORF3a protein :AP3A_SARS2 | 47V(I) 50V 51A 53L 54A 55V 57Q 58S 59A 61K 62I 64A(T) 65L 66N(K) 82N 85L 88V 89T 96L 108L 112I(V) 115L 116Q 119N 122R 144N 145Y 160Y 161N 162S 164T 165D(S) 166T(S) 168V 170T 173D 185Q 187G 188G 189Y 215E(Y) 216S 218Q 223T 225I(V) 228A(V) 230F 232I 234N (identity: 81.6 %/73.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8equ_B_1 identity=73.7% |
queryA 40:SLPFGWLVIGVAFLAVFQSATKIIALNKRWQLALYKGFQFICNLLLLFVTIYSHLLLVAAGMEAQFLYLYALIYFLQCINACRIIMRCWLCWKCKSKNPL: 139 :******* *** ******* *** * ******* ** * ********* ********** ** ******* **** ** ***** ****** *****: 8equ_B_1 40:SLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPL: 139 SecStr : THHHHHHHHHHHHHHHHHTT SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT SHHH: ExpBur :eeeeeeeeebeeebeeeeeebeeeeeeeeebbeebeebeeebeebeeebbebbeebbeeeeeeeeeeeebeeeeeebeeeeeeeebeeebbebbebebbe: Contact : b bb bbb bbb bb bbb b b bb b b b bb b b queryA 140:LYDANYFVCWHTHNYDYCIPYNSVTDTIVVTEGDGISTPKLKEDYQIGGYSEDRHSGVKDYVVVHGYFTEVYYQLESTQITTDTGIENATFFIFNKLV: 237 :******* **** *********** ** * ** ******* * ***** ** * *** **** *** **** * **** ** *: 8equ_B_1 140:LYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDXXXXXXXEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIV: 237 SecStr :H SEEEEEE SS EEEEEESS SEEEEEEE ------- EEEETTEEEE S SEEEEE SS EEEEEEEEEE TTTS TTEEEEEEEE : ExpBur :bbebeebbbbeeeeebbbbbbeeeeeebebbbbe-------eebbebeeeebeeebeeeeebbbbeeeeeeebebeeeeeeeeeeeeebeebebeeee: Contact : bb bbb bbb b b b b bbb bb b b b b b b b |