Protein Model on 4omd_C_1_Y_1 (TEMPLATE: 4omd )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(FURIN_HUMAN) C 1 (C) polymer(polypeptide(L)) [466 aa] Furin :FURIN_HUMAN
2 b Y 1 (C) non-polymer(FMT) FORMIC ACID 313Y 390W 447Q (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4omd_C_1 identity=100.0%
queryA       109:VYQEPTDPKFPQQWYLSGVTQRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANN: 208
                :****************************************************************************************************:
4omd_C_1       2:VYQEPTDPKFPQQWYLSGVTQRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANN: 101
SecStr          :       TTGGG TTTS TTS S  HHHHHHTT S TT EEEEEEB   TT TTTTTTB GGG EETTTTBS       TT GGGHHHHHHHHHH  SSS:    
ExpBur          :eeeebebeebeebbbbeeeeeebbebeebbeeebbbeebbbbbbbbbbbeebebbeebbbeebbebbbeeeeebebeebeeeebeebbbbbbbbbbbbee:    

queryA       209:GVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGY: 308
                :****************************************************************************************************:
4omd_C_1     102:GVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGY: 201
SecStr          :SSS   TTTTSEEEEEE SSS   HHHHHHHHTS TTT  EEEE   S  SSS  B   HHHHHHHHHHHHHTGGGT  EEEEE  SGGGGT BTTSBTT:    
ExpBur          :eebbbbbbbebebbbbbbebeeeeeebbbebbebeeeebebbbbbbebeebbeeeebbeeebeebbeebbeebbeeebbbbbbbbbebbeeebbbbbbbb:    

queryA       309:TNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA: 408
                :****************************************************************************************************:
4omd_C_1     202:TNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA: 301
SecStr          :TSSTTEEEEEEE TTS   TT  B TT  EEEE   STTS  EEEEETTTEEEEEE SHHHHHHHHHHHHHHHHHH TT  HHHHHHHHHHH B TT   :    
ExpBur          :bbbbebbbbbbbbeebeebebbbebbbbbbbbbbbbeeebeebbbbbbeeeebeebebbbbbbbbbbbbbbbbbebbeebbbbbbbbbbbebbeeeebee:    
Contact         :    b                                                                            b                  

queryA       409:NDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGKRLEVRKTVTACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLVSP: 508
                :****************************************************************************************************:
4omd_C_1     302:NDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGKRLEVRKTVTACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLVSP: 401
SecStr          :TT EE TTS EEBTTTBT B  HHHHHHHHHH       EEEEEE  SS EE TTEEEEEEEE SSTTSTT  SEEEEEEEEEEEEES GGGEEEEEE T:    
ExpBur          :eeeeebeeeeebbbbbbbbbbbbbebbeebeebeebeeeeebebebbeeeeebeeebebeeebebbeeeeeebeebbbbbbebbbebeebbbbbbbbbbe:    
Contact         :                                      b                                                             

queryA       509:MGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTA: 574
                :******************************************************************:
4omd_C_1     402:MGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTA: 467
SecStr          :T  EEEEE   TT   SS EEEEEEEE TTTTS   EEEEEEEEE SSS   EEEEEEEEEEEEE :    
ExpBur          :eebebebbeebeebebeebbeebbbbbbbbbbbebeeebbbbbebeeeeebebebeebbbbbbbbe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123