Protein Model on 1q5p_A_1_D_1 (TEMPLATE: 1q5p )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(FURIN_HUMAN) A 1 (A) polymer(polypeptide(L)) [269 aa] Serine protease :SUBS_BACLE
2 b D 1 (A) non-polymer(CA) CALCIUM ION 309T(A) 310N(R) 311S(Y) 314T(A) 316S(A) 344G 350Q(D) (identity: 14.3 %/35.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1q5p_A_1 identity=35.6%
queryA       136:AAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAV: 235
                :**   * ** *  *  ** **   ****  *   ****        *    **   * ***  **  **   *     ***  *    *  *      * :
1q5p_A_1      15:AAHNRGLTGSGVKVAVLDTGIST-HPDL--NIRGGASF-------VPGEPSTQ-DGNGHGTHVAGTIAAL-DNSIGVLGVAPSAELYAVKVLGASGSGAI: 102
SecStr          :HHHTTT S TT EEEEEES    - TT -- EEEEEE ------- TT  S S- SSSHHHHHHHHHH  -SSSSS   SSTT EEEEEE S TTS   H:    
ExpBur          :ebbeeebbbeebebbbbbbbbbe-bebb--eeeeebee-------beeeeeee-beebebbbbbbbbbbe-eeeebbbbbbbebebbbbbbbbeeeeeee:    

queryA       236:EARSLGL---NPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEA: 332
                :     **     *  *    * *      *          *  ***           * **** *        *               *  *    *  :
1q5p_A_1     103:SSIAQGLEWAGNNGMHVANLSLGSPSPSATLE---QAVNSATSRGV---------LVVAASGNEG----AGSIDYPARYANAMAVGATDQNNNRASFSQ-: 185
SecStr          :HHHHHHHHHHHHTT SEEEE   BSS  HHHH---HHHHHHHHTT ---------EEEEE  SS ---- SS  BTTTSTTEEEEEEE TTS B TT  -:    
ExpBur          :ebbbebbebbbeeebebbbbbbeeeeebeebe---ebbeebbeeeb---------bbbbbbbeee----eeebbebbebeebbbbbbbbeeeeebeebb-:    
Contact         :                                                                            bbb  b b                

queryA       333:CSSTLATTYSSGNQNEKQIVTTDLRQKCT------ESHTGTSASAPLAAGIIALTLEANKNLTWRDMQ: 394
                :        *  *      **        *       *  **    *  **  **     **  *   *:
1q5p_A_1     186:--------YGAG----LDIVAPGVNVQSTYPGSTYASLNGTUMATPHVAGAAALVKQ--KNPSWSNVQ: 239
SecStr          :-------- STT----EEEEEE SSEEEEETTTEEEEE SHHHHHHHHHHHHHHHHH--H TT  HHH:    
ExpBur          :--------ebee----bbbbbbbbebebbeeeeeeeeeebbebbbbbbbbbbbbbbe--ebeeeebee:    
Contact         :           b     b                                                                                  


Input Residue Numbers for Focused Sites

ex) 2,15,123