Protein Model on 1p8j_F_1_G_1 (TEMPLATE: 1p8j )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(FURIN_HUMAN) F 1 (F) polymer(polypeptide(L)) [468 aa] Furin precursor :FURI_MOUSE
2 b G 1 (G) polymer(polypeptide(L)) [467 aa] Furin precursor :FURI_MOUSE 173F 230E 232T 234A 235V 237A 238R 243N 268R 269L 272E 275F 276R 279S 280Q 313Y 447Q 448R 449K 451I 453D(E) 477E 478P 479N 490R 529N 530D 571Y (identity: 96.4 %/97.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1p8j_F_1 identity=97.9%
queryA       108:DVYQEPTDPKFPQQWYLSGVTQRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVAN: 207
                :**************************** ***** *****************************************************************:
1p8j_F_1       1:DVYQEPTDPKFPQQWYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVAN: 100
SecStr          :        TTGGG TTTS TTS S   HHHHHTT S TT EEEEEEB   TT TTTGGGB GGG EETTTTBS       SS TT HHHHHHHHHH  SS:    
ExpBur          :eeeeebebeebeebbbbbbeeeebbebeebbeeebbbeebbbbbbbbbbbeebebbeebbbeebbebbeeeeeebebeebeebebeebbbbbbbbbbbbe:    
Contact         :                                                                 b                                  

queryA       208:NGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDG: 307
                :****************************************************************************************************:
1p8j_F_1     101:NGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDG: 200
SecStr          :SSSS   TTTTSEEEEEE SSS   HHHHHHHHTS TTT  EEEE   S  SSS  B   HHHHHHHHHHHHHHHHHT  EEEEE  S GGGT BGGGBT:    
ExpBur          :eeebbbbbbbebebbbbbbebeeeeeebbbebbebeeeebbbbbbbbebeebbeeeebbeeebeebbeebbeebbeeebbbbbbbbbebbeeebbbbbbb:    
Contact         :                      b b bb bb    b                        bb  b  bb  bb                           

queryA       308:YTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLN: 407
                :****************************************************************************************************:
1p8j_F_1     201:YTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLN: 300
SecStr          :TTTSTTEEEEEEE TTS   TT  B TT  EEEE   STTS  EEEEETTTEEEEEE SHHHHHHHHHHHHHHHHHH TT  HHHHHHHHHHH B TT  :    
ExpBur          :bbbbbbbbbbbbbbbebeebebbbebbbbbbbbbbbbeeebeebbbbbbeeeebeebebbbbbbbbbbbbbbbbbbbbeebbbbbbbbbbbebbeeeebe:    
Contact         :     b                                                                                              

queryA       408:ANDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGKRLEVRKTVTACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLVS: 507
                :* ******************************************  ** ************* **************** ****************** *:
1p8j_F_1     301:ADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIGKRLEVRKAVTACLGEPNHITRLEHVQARLTLSYNRRGDLAIHLIS: 400
SecStr          : S  EE TTS EEBTTTBT B  HHHHHHHHHT       EEEEEE  SS EE TTEEEEEEEE  STTSTT  SEEEEEEEEEEEEES GGGEEEEEE :    
ExpBur          :eeeeeebeeeeebbbbbbbbbbbbbbbbeebeebeebeeeeebebebbeeeeebeeebebeeebebbeeeeeebeebbbbbbebbbebbebbebbbbbbb:    
Contact         :                                       bbb b b                       bbb          b                 

queryA       508:PMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTAP: 575
                :************************************ *******************************:
1p8j_F_1     401:PMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEANNYGTLTKFTLVLYGTAP: 468
SecStr          :TT  EEEEE   TT   S  EEEEEEEE TTTT    EEEEEEEEE SSS   EEEEEEEEEEEEE  :    
ExpBur          :eeebebebbeebeebeeeebbeebbbbbbbbbbbebeeebbbbbebeeeeebebebeebbbbbbbbee:    
Contact         :                     bb                                        b                                    


Input Residue Numbers for Focused Sites

ex) 2,15,123