Protein Model on 1p8j_D_1_C_1 (TEMPLATE: 1p8j )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(FURIN_HUMAN) D 1 (D) polymer(polypeptide(L)) [467 aa] Furin precursor :FURI_MOUSE
2 b C 1 (C) polymer(polypeptide(L)) [467 aa] Furin precursor :FURI_MOUSE 173F 230E 232T 234A 235V 237A 238R 243N 268R 269L 272E 275F 276R 279S 280Q 447Q 448R 449K 451I 453D(E) 477E 478P 479N 490R 530D 571Y (identity: 96.2 %/97.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1p8j_D_1 identity=97.9%
queryA       109:VYQEPTDPKFPQQWYLSGVTQRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANN: 208
                :*************************** ***** ******************************************************************:
1p8j_D_1       2:VYQEPTDPKFPQQWYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANN: 101
SecStr          :       TTGGG TTTS TTS S   HHHHHTT S TT EEEEEEB   TT TTTGGGB GGG EETTTTBS       TT TT HHHHHHHHHH  SSS:    
ExpBur          :eeeebebeebeebbbbbeeeeebbbbeebbeeebbbeebbbbbbbbbbbeebebbeebbbeebbbbbeeeeeebebeebeeeebeebbbbbbbbbbbbee:    
Contact         :                                                                b                                   

queryA       209:GVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGY: 308
                :****************************************************************************************************:
1p8j_D_1     102:GVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGY: 201
SecStr          :SSS   TTTTSEEEEEE SSS   HHHHHHHHTS TTT  EEEE   S  SSS  B   HHHHHHHHHHHHHHHHHT  EEEEE  S GGGT BGGGBTT:    
ExpBur          :eebbbbbbbebebbbbbbebeeeeeebbbebbebeeeebbbbbbbbebeebbeeeebbeeebeebbeebbeebbeeebbbbbbbbbebbeeebbbbbbbb:    
Contact         :                     b b bb bb    b                        bb  b  bb  bb                            

queryA       309:TNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA: 408
                :****************************************************************************************************:
1p8j_D_1     202:TNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA: 301
SecStr          :TT TTEEEEEEE TTS   TT  B TT  EEEE   STTS  EEEEETTTEEEEEE SHHHHHHHHHHHHHHHHHH TT  HHHHHHHHHHH B TT   :    
ExpBur          :bbbbbbbbbbbbbbebeebebbbebbbbbbbbbbbbeeebeebbbbbbeeeebeebebbbbbbbbbbbbbbbbbebeeebbbbbbbbbbbebbeeeebeb:    

queryA       409:NDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGKRLEVRKTVTACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLVSP: 508
                : ******************************************  ** ************* **************** ****************** **:
1p8j_D_1     302:DDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIGKRLEVRKAVTACLGEPNHITRLEHVQARLTLSYNRRGDLAIHLISP: 401
SecStr          :S  EE TTS EEBTTTBT B  HHHHHHHHHT       EEEEEE  SS EE TTEEEEEEEE  STTSTT  SEEEEEEEEEEEEES GGGEEEEEE T:    
ExpBur          :eeeeebeeeeebbbbbbbbbbbbbbbbeebeebeebeeeeebebebbeeeeebbeebebeeebebbeeeeeebeebbbbbbebbbebeebbbbbbbbebe:    
Contact         :                                      bbb b b                       bbb          b                  

queryA       509:MGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTAP: 575
                :*********************************** *******************************:
1p8j_D_1     402:MGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEANNYGTLTKFTLVLYGTAP: 468
SecStr          :T  EEEEE   TT   S  EEEEEEEE TTTT    EEEEEEEEE SSS   EEEEEEEEEEEEE  :    
ExpBur          :eebebbbbeebeebeeeebbeebbbbbbbbbbbebeeebbbbbebeeeeebebebeebbbbbbbbee:    
Contact         :                     b                                        b                                     


Input Residue Numbers for Focused Sites

ex) 2,15,123