[pdbjlvh2]Protein Model on 8tcf_A_1_J

Protein Model on 8tcf_A_1_J_1 (TEMPLATE: 8tcf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ITAL_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [444 aa]	Integrin alpha-V heavy chain :ITAV_HUMAN
2	b		J 1 (A)	non-polymer(CA)	CALCIUM ION	590D 592E(D) 594D(N) 596L(Y) 598D 612S(A) (identity: 33.3 %/38.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8tcf_A_1 identity=38.5%

queryA       403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494
                :**** *              ** **     * *        *   *      * *   ***      *   *       ******         *  * *:
8tcf_A_1     221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315
SecStr          : BTSEEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT  EEEEEE SSTTS TTSSEEEE SSSSSS EEE-EEETT EEE TTS EEE  EE:    
ExpBur          :ebbebbbbbebeeeeebbbbbbbbebeeeebbbbbbb----beebeeeeebebeeeebebbebbbbbbbbebeebbbb-bbbbebeeeeeeeeeebbbbb:    

queryA       495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW---------FG: 582
                :     *  *      * *       *** **  * *   **  * *  **       * *******  **   ***  **       **         **:
8tcf_A_1     316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSGCPPSFG: 406
SecStr          :EEEEE TTS EEEEEEE SSTT--S TTSEEEEEESTT SSS EEEEEETT SGGG  EEEEE   TTS  SS SEEEE -------    SSSS   TT:    
ExpBur          :bbbbbeeeeeeeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbebeeeeebbbbbbbbeeebbeeeeebebeb-------ebeeeeeeebbbb:    

queryA       583:RSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVV: 616
                : *  *  *    *  *  ***      *    *** :
8tcf_A_1     407:YSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVI: 442
SecStr          :SSEEEEE SSSSSS EEEEEEGGGTEEEEE B    :    
ExpBur          :ebbebebebeeeebbbbbbbbbbbbebbbbebeeee:    
Contact         :       b b b b b               b

Protein Model on 8tcf_A_1_J_1 (TEMPLATE: 8tcf )

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