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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | B 1 (E) | polymer(polypeptide(L)) [520 aa] | Integrin alpha-V heavy chain :ITAV_HUMAN | |
2 | b | A 1 (B) | polymer(polypeptide(L)) [358 aa] | Integrin beta-3 :ITB3_HUMAN | 403Y 406Y 426R 428Q(R) 429H(T) 456I(M) 457G(A) 459Y 462G(F) 483P 484L 486Y(M) 490R(E) 516Y(F) 520R 545L(Y) 583R(Y) (identity: 41.2 %/38.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8ij5_B_1 identity=38.5% |
queryA 403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494 :**** * ** ** * * * * * * *** * * ****** * * *: 8ij5_B_1 221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315 SecStr : TTSSEEEE SSSSS EEEEEETT SSSS EEEE ----SSS EEEE SSTTS TTSEEEEE SS SSS EEE-EEETT EEE SSS EEE BEE: ExpBur :ebbebbbebebeeeeebbbbbbbbebeebebebbbbb----beebeeeeebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebeeeeeeeeeebbbbb: Contact :b b b bb bb b b bb b b queryA 495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGR: 583 : * * * * *** ** * * ** * * ** * ******* ** *** ** ** ** : 8ij5_B_1 316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGY: 406 SecStr :EEEEE TTS EEEEEEE SSTT-- BSSEEEEEE SS SSS EEEEEETT SSTT EEEEEEEETTEE SS SEEEE ------- S SS EEE: ExpBur :bbbbbeeebebeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbebbeeebbbbbbbbbeeebbeeeebbebeb-------eeeeeeeebbbbe: Contact : b b b b b queryA 584:SIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVV: 616 :* * * * * *** * *** : 8ij5_B_1 407:SMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVI: 441 SecStr :EEEEEE SS SSS EEEEEETTTTEEEEEEB EE: ExpBur :bbbbeeebbebebbbbbbbbbbbbebbbbbbbbbb: |