[pdbjlvh2]Protein Model on 6ujc_A_1_J

Protein Model on 6ujc_A_1_J_1 (TEMPLATE: 6ujc )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ITAL_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [593 aa]	Integrin alpha-V :ITAV_HUMAN
2	b		J 1 (A)	non-polymer(CA)	CALCIUM ION	468D 470D(N) 472D 474E(Y) 476E(D) (identity: 40.0 %/32.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6ujc_A_1 identity=32.4%

queryA       403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494
                :**** *              ** **     * *        *   *      * *   ***      *   *       ******         *  * *:
6ujc_A_1     221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315
SecStr          : BTSEEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT  EEEEEE SSTTS TTSSEEEE SSSSSS EEE-EEETT EEE TTS EEE  EE:    
ExpBur          :ebbebbbbbebeeeeebbbbbbbbebeeeebbbbbbb----beebeeeeebebeeeebebbebbbbbbbbebeebbbb-bbbbebeeeeeeeeeebbbbb:    
Contact         :                                                                   b b b b b                        

queryA       495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGR: 583
                :     *  *      * *       *** **  * *   **  * *  **       * *******  **   ***  **       **        ** :
6ujc_A_1     316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGY: 406
SecStr          :EEEEE TTS EEEEEEE SSTT--S TTSEEEEEESTT SSS EEEEEETT SGGG  EEEEE   TTS  SS SEEEE ------- S  SSS   TTS:    
ExpBur          :bbbbbeeeeebeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbebeeeebbbbbbbbbeeebbbeeeebebeb-------ebeeeeeebbbbe:    

queryA       584:SIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDG: 679
                :*  *  *    *  *  ***      *    ***          *         **           *   *     *   *        *    * ** :
6ujc_A_1     407:SMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDK: 501
SecStr          :SEEEEE SS SSS EEEEEEGGGTEEEEEEE  EEEEEEEEEEESSEE SS   EE SSS  EE EEEEEEEEEEE SS   S-----EEEEEEEEEES :    
ExpBur          :ebebebebbebebbbbbbbbbbbbebbbbbbbbbbebebebeebeeeebeeeeeeeeeeeeeeebebbbebbbebeeeeebee-----ebbbbbebebbe:    

queryA       680:HRTR---RRGLFPGGR---HELRRNIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSL: 733
                :       ** **   *   *     *     * *              *   **       *:
6ujc_A_1     502:LKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL: 563
SecStr          : S TTS   EEETTTTBSEEEEEEEEETTS  EEEEEEEEE  TTS S S  EEEEEEEEEE:    
ExpBur          :eeeeeeeeebbbeeeeeeeeeeebebebeeeeeeeeeebbebeeeeeeeeeeebebebebeb:

Protein Model on 6ujc_A_1_J_1 (TEMPLATE: 6ujc )

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