Protein Model on 6avq_A_1_B_1 (TEMPLATE: 6avq )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [927 aa] Integrin alpha-V :ITAV_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [688 aa] Integrin beta-3 :ITB3_HUMAN 680H(L) 829F 830R(I) (identity: 33.3 %/29.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6avq_A_1 identity=29.2%
queryA       340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425
                :**           * * *      *  *  *   * *                        *   *    *     **** *              ** *:
6avq_A_1     145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244
SecStr          :S  STTTTTT  TTSEEEE STTEEEEE TTHHHHTB EEEEEHHHHHHS  TT S    TT EE     GGGTT  BTSEEEEE  SSSSS EEEEEET:    
ExpBur          :eeeeeeebbbbbbbebebebeeebebebbbebbebbbbbbebbeebeeeeeeeeeeeeebeeebeeeeeeeebeebbbbbbbbeeeeeeeeebbbbbbbb:    

queryA       426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518
                :*     * *        *   *      * *   ***      *   *       ******         *  * *     *  *      * *      :
6avq_A_1     245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337
SecStr          :TTTTTT EEEEEE----TTEEEEEEEEE SSTTS TTSEEEEE TTSSS  EEE-EEETT EEE TTS EEE  EEEEEE  TTS  EEEEEE SSTT--:    
ExpBur          :bbeeebbbbbbbe----eeeeeeeeeeeeebeebbbbebbbebbbeeeeeebeb-bbbbebeeeeeeeeebebbbbeeeeeeeeeeeeeeeeeeeeee--:    
Contact         :                                                                 b                                  

queryA       519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605
                : *** **  * *   **  * *  **       * *******  **   ***  **       **        ** *  *  *    *  *  ***    :
6avq_A_1     338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430
SecStr          :  TTSEEEEEE TTSSS  EEEEEETT SSS   EEEE  EETTEE  S SEEEE -------    SSS   TTSSEEE    SSSS   EEEEEGGGT:    
ExpBur          :bbbbebbbebbeeeeeebbbeeebbbbbeeeebbebbbbeebeeeeeeeeebeeee-------eeeeeeeebebbbbebeeeeeeebebbbebbbbbeeb:    

queryA       606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697
                :  *    ***          *         **           *   *     *   *        *    * **        ** **   *   *    :
6avq_A_1     431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525
SecStr          :EEEEE B  EEEEEEEEEESS EE TT EEEE TTSS EEEEEEEEEEEEEEE SS  S-----EEEEEEEEEESTTTTTTS   EEETTT SSEEEEEE:    
ExpBur          :bbeebebbbebeeeeeeeeeeeeeeeeeeebeeeeeeeebbebeebeebbeeeeeeeee-----ebbbeeeeebbeebeeeeeebbbbeeeeeeeeeeee:    
Contact         :                                                                            b   b                   

queryA       698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
                : *     * *              *   **       *        * *  *      ***    *   *    *     ****  *   * **      :
6avq_A_1     526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614
SecStr          :EEETTT  EEEEEEEEE  TTT   SSS EEEEEEEEE-------- SGGG  TTS   EE TT  SEEEEEEEE  S-- TTTT   B EEEEEE-ES :    
ExpBur          :ebeeeeeeeeeeeeebeeeeeebeeeeeeeeebbeeee--------eeeebeeeeeebeeeeeeeeeebebeebeeee--beeeeeeebeeebeee-eee:    

queryA       791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
                :          *       *  * **   *    *    *  *           **    *      *   *    *  ***        *     *    :
6avq_A_1     615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709
SecStr          : EEETTS EEEEEEEEEEE SB  SS EEEEE  TTEEEEEE-  S TTS    EEEE  SS---  EEEEE  SS - TT  EEEEEEEEE   SS  S:    
ExpBur          :eebbbeeebeeeeeeeeebeebbebebebeeebeeeeeeeee-eeeeeebeebeeeeeeeee---ebebebeeeeeb-eeeeeeebbebbebeeeeeeee:    
Contact         :                                      bb                                                            

queryA       891:SVELHANVTCNN: 902
                :**         *:
6avq_A_1     710:SVKFDLQIQSSN: 721
SecStr          :EEEEEEEEE S :    
ExpBur          :eeeeebbbbbeb:

Input Residue Numbers for Focused Sites

ex) 2,15,123