Protein Model on 5es4_E_1_F_1
(TEMPLATE: 
5es4
)Protein Model on 5es4_E_1_F_1
(TEMPLATE: 5es4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | E 1 (E) | polymer(polypeptide(L)) [884 aa] | Integrin alpha-X :ITAX_HUMAN | |
| 2 | b | F 1 (F) | polymer(polypeptide(L)) [674 aa] | Integrin beta-2 :ITB2_HUMAN | 47Y(D) 62G(Q) 94Y(S) 97M(L) 114G(T) 116S(H) 118T(E) 120D(G) 121Q(R) 122N 123T(M) 125L 349L(M) 351S(Q) 354I(F) 368V 373W 401A(D) 403Y 406Y 426R 429H 456I 457G 459Y 484L(H) 486Y 488E(Q) 503G(R) 505E(W) 514P(Q) 518L(W) 520R 580W(Y) 680H(G) 681R 682T(L) 719Q(E) 728S(R) 830R 831K(Y) 833E(A) 843V(L) 864S(N) 865S(H) 866P(L) 867I 869K(R) 924N(Y) 935L(K) 1070S(Q) (identity: 31.4 %/37.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5es4_E_1 identity=37.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * :
5es4_E_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98
SecStr : B SSS EEEE STT--TTSEEEEETTTEEEEEETT SBTTB BEEEEEETTTTEEEE TT S BTSEEEEEETTEEEEEEEEEEEEEET:
ExpBur :bbbbeeeebebeeebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbeeeeebeebeeeeeeebeebbbbebbbebeeeeebbbbbbbbebebe:
Contact : b b b b b b b b
queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
: * ** *** * :
5es4_E_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr :TEEEEEEEEEEE----------------------------------------------------------------------------------------:
ExpBur :eeebebbbbbbb----------------------------------------------------------------------------------------:
Contact :bbb b
queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
: :
5es4_E_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342
: :
5es4_E_1 111:----------------------GPTQLTQRLPVSRQECPRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188
SecStr :---------------------- SSS EEESSS -----------------------------------------------------------:
ExpBur :----------------------beeeeeeebbeeebeeeee-----------------------------------------------------------:
queryA -1:----------------------------------------------------------------------------------------------------: -1
: :
5es4_E_1 189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405
: ** * * ** * **** * ** *** * ***:
5es4_E_1 289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387
SecStr :------------------------------------- SSS TTSSEE TT EEEESSHHHHT EEEE TTS- EEE TT GGGTTS TT:
ExpBur :-------------------------------------eeeeeeebebbebbbbbeebbbbbbbbbebebbbbbbbbeee-eeeebebeeeeeebeebbbb:
Contact : b b b b b b b
queryA 406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQLG: 503
:* * * * ******* * * * * ********* ** **** ** * * ***** * *** * * :
5es4_E_1 388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484
SecStr :SE-EEEEESSSSEEEEEEETTGGGT EEEEEE--EETTEEEEEEEEE SSTT TTSEEEEE SS SSS EEEEE TT EETTEEE EEEEE STT :
ExpBur :eb-bbbbeeeeebbbbbbbbebeeebbbbbbb--eeeeebeeebebebeeeebebbbbbbbbbbeeeebbbbbbbbbbebeeeeebbbbbbbbbbeeeee:
Contact :b b b bb b b b b b
queryA 504:FEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVA: 600
: * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * *:
5es4_E_1 485:WWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLA: 584
SecStr : EEE SSEEEEEETSEEEEEE SSSSS EEEEEETTHHHHTBEEEEEEEETTTEE SS SEEEEHHHH TT SBTSEEEEEE SSSSSS EEE:
ExpBur :beeeeebeeeeebeebebbebbbebeebbbeebbbbbbbbbbbeeeebbbbbbbbeeeeebeeeeebbbbbeeeeeebeebbbbbbbebebbebebebbb:
Contact : b b b b b
queryA 601:VGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRR: 697
:*** * * *** * * ***** ** * ** * * * * * ** * * * * *:
5es4_E_1 585:VGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSR: 683
SecStr :EEETTEEEEEEB EE EEEEEEEESSSB TTTT SSSS S- EEEEEEEEEEE S TT STTTS EEEEEEEEESTT SS S EETTTTBSEEEE:
ExpBur :bbbeebbbbbbbbbbbebbeeeebeeeebeeebbeeeeeeeee-ebebebbbbbebeeebeebeeebbeebebebebbbbeeeeeebbebeeeeeeebee:
Contact : bbb
queryA 698:NIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
: * * * ** * ** *** * ** *** * * ******* * * ** *** :
5es4_E_1 684:VRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGL: 771
SecStr :EEEE SS EEEEEEEEE S S SS EEEEEEEE ------------ GGG EE TTS EEEEE B S SS EEEEEE TT :
ExpBur :eeebbeeeeebebebbbebebeeeeebbebebebeb------------ebeebeeeebbebebbeeeeeeeebebbbebeeeeeeeeebebbbebebeee:
Contact : b b b
queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSS: 887
: * * * * ** * * *** * * * * * * ** ** * * :
5es4_E_1 772:KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAV: 870
SecStr : SEEETTB EEEEEEEEEESSS BSS EEEEEEETTEEEE SS SSS EEEEEEE SSS-SEEEEEEEE SS B TT EEEEEEEEEE TT :
ExpBur :eebbbeeeeebebebebebebeebebbbbbbebbeebeeeeeeeeeeeeeebebebebeeeeeeee-eeeebebebeeeebebeeeeebebbbebeeebe:
Contact : bb b bb bbbb b
queryA 888:WGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---: 972
: ** * *** * * ** * * * * * * * * * *** * * * *** :
5es4_E_1 871:LGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMD: 966
SecStr : SEEEEEEEEE TT ---- SSS EEEEEEEEEEE EEEEE S S SS S EEEEEEEEEEEE SS EEEEEEEEEEEEETTEESEEE:
ExpBur :beeebebbbebbbbbee----eeeeeeeeeeeeebebbbbbbbeebeeeeeebebeeeeeeeeeebebebebbbebeeebebbbbbebbbebeeeebbee:
Contact : b b
queryA 973:VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFH:1066
:* * * * * ** * * * *** * * * * * * * * * * * :
5es4_E_1 967:VEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQ:1062
SecStr :EEEE --SS EEEEE HHHHTTSS -EE TTTSEEEEEEEEEEEE TT EEEEEEEEEEESGGGGGG SS -EEEEEEEEE TTTEEE:
ExpBur :beeebe--eeeeeeeeeeeeeeeeeebeeebeeee-ebeeebbbbbbbebbbeebbbeebbbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeeeb:
queryA 1067:LYGSNA:1072
:* * *:
5es4_E_1 1063:LPGQEA:1068
SecStr : SSTTG:
ExpBur :eeeeee:
Contact : b
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[assembly_id:3]
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