Protein Model on 5es4_A_1_B_1
(TEMPLATE: 
5es4
)Protein Model on 5es4_A_1_B_1
(TEMPLATE: 5es4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [1080 aa] | Integrin alpha-X :ITAX_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [674 aa] | Integrin beta-2 :ITB2_HUMAN | 47Y(D) 62G(Q) 97M(L) 114G(T) 116S(H) 118T(E) 120D(G) 121Q(R) 122N 123T(M) 125L 309E 329K(E) 333V(A) 335E 345F 349L(M) 351S(Q) 354I(F) 368V 373W 401A(D) 403Y 406Y 426R 429H 455Q 456I 457G 459Y 484L(H) 486Y 488E(Q) 501Q(R) 503G(W) 504F(C) 518L(W) 520R 580W(Y) 604E(R) 679G(P) 680H(G) 681R 682T(L) 831K(Y) 832V 833E(A) 843V(L) 865S(H) 866P(L) 867I 869K(R) 935L(K) 936Y 1070S(Q) (identity: 38.2 %/37.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5es4_A_1 identity=37.7% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * :
5es4_A_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98
SecStr : EEEEEEEEEE STT--TTSEEEEETTTEEEEEEEEEEEETTEEEEEEEEETTT EEE TTSBS BTSEEEEETTTTEEEEEEEEEEEEET:
ExpBur :bbbbeeeebebeeebeb--bbebbbbbbeeebbbbbbeeeeeeeebbbbbebbeeeeebeeeebeebeebeebbbbebbbeeeeeeebbbbbbbbebeee:
Contact : b b b b b b b
queryA 121:QNTYLSGLCYLFRQNLQGP--MLQGRP-GFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDP: 217
: * ** *** * ** * * *** * *** *** * * * * * ** *** * * * *:
5es4_A_1 99:RNMYLTGLCFLL-----GPTQLTQRLPVSRQECPRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNP: 193
SecStr :TEEEEEEEEEEE----- TTS EEESSS EEEEEEEE TTS HHHHHHHHHHHHHHHTTS TTTEEEEEEEESSSEEEEE HHHHHH SST:
ExpBur :eeebbbbbbbbb-----beeeebeebbeeeeeeeeeebbbbbbbbbbeebeeeebeebbebbebbbeebeeeebbbbbbbbbeeeeebbbbeebeeeeeb:
Contact :bbb b
queryA 218:DALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITD----GEATDSGNIDAAKD---IIRYIIGIGKHFQTKESQETLHKFASKPASEF: 310
: ** * * * ** * * *** ** * ** *** * * * **** ** * ** * * **** * :
5es4_A_1 194:LSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEH: 293
SecStr :HHHHHT S B HHHHHHHHHHHTTSGGGT SS EEEEEEEESS BS SS HHHHHHHHHHHTEEEEEEEESGGGSSHHHHHHHHHHS SSHHHH:
ExpBur :eeebeebebbeeebebbbbbebbbeebbeeeebbbeebbbbbbbbbbbeeeebeeebeebbeebeeeebebbbbbbbeebeeeebeebbeebbbeeeeeb:
Contact : b
queryA 311:VKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTW: 410
: * *** * ** **** ** * * ** * **** * ** *** * **** * :
5es4_A_1 294:IFKVEDFDALKDIQNQLKEKIFAIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLGYS-TE: 391
SecStr :EEEESSSSTHHHHHHHHHHHHHS SSTT TTS TTSSB SS EEEE SHHHHTBEEEE TTS- EEE TT GGGTT BTSE-EE:
ExpBur :beebeebeebeebeeebbeebeeeeeeeeeeeeeeeeebbbbbebbbbbeebbbbbbbbbebebbbbbbbbeee-eeeebebeeeeeebeebebbeb-be:
Contact : b b b b b b b b b b b b
queryA 411:LPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI----YQRRQLGFEE: 506
:* * ******* * * * * ********* ** **** ** * * ***** * *** * * :
5es4_A_1 392:LALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDA: 489
SecStr :EEE SS EEEEEEETTGGGTBEEEEEE--EETTEEEEEEEEE SSTT BTS EEEE SS SSS EEEEE TT B SSEEE EEEEE SS E:
ExpBur :bbeeeeebbbbbbbbebeebbbbbbbb--eeeeebeebbebebeeeebebbbbbbbbebeeeebbebbbbbbbebeeeeebbbbbbbbebebeeebeeeb:
Contact : b b bbb b b b b b bb
queryA 507:VSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA: 603
:* * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * ****:
5es4_A_1 490:V--LYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGA: 587
SecStr :E--E SSEEEEEETS EEEEEE SSSSSEEEEEEETTHHHHTBEEEEEEEETTTEE SS SEEEEHHHH TT SBTSEEEEEE TTSSSS EEEEEE:
ExpBur :e--bebeeebeebebbbbbbebeebbbeebbbbbbbbbbbeeeebbbbbbbbeeeeebbeeeebbbbbeeeeeebeebbbbbbbebebbebebebbbbbb:
Contact : b b b
queryA 604:ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRRNIA: 700
: * * *** * * ***** ** * ** * * * * * ** * * * * * :
5es4_A_1 588:RGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSRVRV: 686
SecStr :TTEEEEEEE EE EEEEEEEESSSB HHHHS SSTT S- EEEEEEEEEEE S TT STTTS EEEEEEEEESTTSS EESSSSSSEEEEEEE:
ExpBur :eebbbbbbbbbbbbebeebebeeeebeeebbeeeeeeeee-eeebebbbbbebeeeeeebeeebbeebebebebbbbeeeeeebbebeeeeeeebeeeee:
Contact :b bbbb
queryA 701:VTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARSRAL: 793
: * * * ** * ** *** * ** *** * * ******* * * ** *** *:
5es4_A_1 687:LGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSL: 774
SecStr :E SS EEEEEEEEE SS S SSS EEEEEEEEE------------ SSTT EE TTS EEEEEE B S TT EEEEEE TT SE:
ExpBur :beeeeeebebebebebebeebeebbebebebeb------------ebeebeeeebbeebbbeeeeeeeebebbbebeeeeeeeeeeebbbebebeeeeeb:
Contact : b
queryA 794:RLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
: * * * ** * * *** * * * * * * ** ** * * **:
5es4_A_1 775:LVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGD: 873
SecStr :EETTB EEEEEEEEEESSS EES EEEEEEETTEEEE SS SS EEEEEEEETTT-TEEEEEEEE S EE TT EEEEEEEEEE TT S:
ExpBur :bbeeeeebebebebebeebebebbbbbbebbeebebeeeeeeeeeeeebebebebeeeeeeee-eeeebebebbeeebeeeeeeebebbbebeeebebee:
Contact : bbb bb bbb b
queryA 891:SVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---VGV: 975
: * *** * * ** * * * * * * * * * *** * * * *** * *:
5es4_A_1 874:RLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMDVEV: 969
SecStr :EEEEEEEEE TT ---- SSS EEEEEEEEEEE EEEEE S SS SS EEEEEEEEEEEE SSS EEEEEEEEEEEEETTEESS S EE:
ExpBur :ebebbbebebbbee----eeeeeeeeeeebebebbbbbbbeebeeeeeebebeeeeeeeeeebebebbbbbebebebebbbbbebbeebeeeebbeebeb:
Contact : bb
queryA 976:PQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFHLYG:1069
: * * * ** * * * *** * * * * * * * * * * * * *:
5es4_A_1 970:SHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQLPG:1065
SecStr :E --SS EEEEE HHHHHHSS -EE TTTSEEEEEEEEEEEE TT EEEEEEEEEEESTTHHHHT S -EEEEEEEEE TTTEEE SS:
ExpBur :ebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebeeebbbbbebebebeebebbeebebbbebebbbbbbeebeeeeb-bbbbbbebebeeeeeebeee:
queryA 1070:SNA:1072
: *:
5es4_A_1 1066:QEA:1068
SecStr :TTG:
ExpBur :eee:
Contact :b
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[assembly_id:1]
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