Protein Model on 4nen_A_1_B_1
(TEMPLATE: 
4nen
)Protein Model on 4nen_A_1_B_1
(TEMPLATE: 4nen
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [1063 aa] | Integrin alpha-X :ITAX_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [665 aa] | Integrin beta-2 :ITB2_HUMAN | 47Y(D) 62G(Q) 94Y(S) 97M(L) 114G(T) 116S(H) 118T(E) 120D(G) 121Q(R) 122N 123T(M) 125L 329K(E) 334I 335E 345F 349L(M) 351S(Q) 354I(F) 368V 373W 401A(D) 403Y 406Y 426R 429H 430M(T) 456I 457G 459Y 484L(H) 486Y 500R 518L(W) 520R 580W(Y) 604E(R) 680H(G) 681R 682T(L) 722I(V) 723S(T) 728S(R) 831K(Y) 832V 833E(A) 864S(N) 865S(H) 866P(L) 867I 869K(R) 924N(Y) 931E 932D(Q) 935L(K) 936Y 938S(C) 1026R(Q) (identity: 37.9 %/37.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4nen_A_1 identity=37.0% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * ** ** * * * * **** ** **** ** * * * ** ** *** * * :
4nen_A_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAADQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98
SecStr : B SSS EEEE STT--TTSEEEEETTTEEEEEEEEEEEETTEEEEEEEEETTT SEEE TT BS BTSEEEEETTTTEEEEEEEEEEEEET:
ExpBur :bbbbeeeebebebebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbbeeeebeebeeeebeebeebbbbebbbeeeeeebbbbbbbbbebebe:
Contact : b b b b b b b b
queryA 121:QNTYLSGLCYLFRQNLQGP--MLQGRP-GFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDP: 217
: * ** *** * ** * * *** * *** *** * * * * * ** *** * * * *:
4nen_A_1 99:RNMYLTGLCFLL-----GPTQLTQRLPVSRQECPRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNP: 193
SecStr :TEEEEEEEEEEE----- SSS EEESSS B EEEEEEEE STTS THHHHHHHHHHHHHHTTS TTTEEEEEEEESSSEEEEE HHHHHH S G:
ExpBur :ebebbbbbbbbb-----beeeeeeebbeeebebebeebbbbbbbbbbeebeeeebeebbebbebbbeebeeebbbbbbbbbbeeeeebbbbeebeebeeb:
Contact :bbb b
queryA 218:DALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITD----GEATDSGNIDAAKD---IIRYIIGIGKHFQTKESQETLHKFASKPASEF: 310
: ** * * * ** * * *** ** * ** *** * * * **** ** * ** * * **** * :
4nen_A_1 194:LSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEH: 293
SecStr :GGGGGG S B HHHHHHHHHTTTSSGGGT SSSEEEEEEEE S BS S HHHHHHHHHHTT EEEEEE GGGTTSHHHHHHHHHHS SSGGGT:
ExpBur :eeebeebeeeeeebebbebbeebbeebbeeeebbbeebeebbbbbbbbeeeebeeebeebbeebeeeebebbbbbbeebeeeeebeebbbebbbeebeeb:
queryA 311:VKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTW: 410
: * *** * ** **** ** * * ** * **** * ** * *** * **** * :
4nen_A_1 294:IFKVEDFDALKDIQNQLKEKIFAIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-DPTFINMSQENVDMRDSYLGYS-TE: 391
SecStr :EEESS SHHHHHH B B GGG SS B STT EEEEEEEETTEEEEEETTHHHHT EEE TTS- EEE TT GGGTTS TTSS-EE:
ExpBur :beebeeeebbeeebeeeeebebbeeeeeeeebeebeebbbbbbebbbbbeebbbbbbbbbebebbbbbbbbeee-eeeebebeeeeeebeebebbeb-be:
Contact : b bb b b b b b b b b b
queryA 411:LPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI----YQRRQLGFEE: 506
:* * ******* * * * * ********* ** **** ** * * ***** * *** * * :
4nen_A_1 392:LALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDA: 489
SecStr :EEEETTEEEEEEEETTGGGT EEEEEE--ESSSSEEEEEEEE STTS TTSSEEEE SS SSS EEEEE TT B SSEEE EEEEE TT E:
ExpBur :bbeeeeebbbbbbbbebeebbbbbbbb--eeeeebeeebebebeeeebebbbbbbbbebeeeebbbbbbbbbbebeeeeebbbbbbbebeeeeeebeeee:
Contact : b bb bb b b b b
queryA 507:VSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA: 603
:* * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * ****:
4nen_A_1 490:V--LYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGA: 587
SecStr :E--E SSEEEEEETSEEEE SSSSSS EEEE TTHHHHTBEEEEE EETTTEE SS SEEEEHHHH TT SBTSSEEEEE SSSSS EEEEEE:
ExpBur :e--bbbeeebeebebbebbbebbebbeeebbbbbbbbbbbeeeebbbbbbbbeeeebbbeeeebbbbbeebeeebeebbebbbbebebbebebebbbbbb:
Contact : b b b
queryA 604:ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGR-HELRRNIA: 700
: * * *** * * ***** ** * ** * * * * * ** * * * * * :
4nen_A_1 588:RGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKTRSLSRVRV: 686
SecStr :TTEEEEEEB EEEEEEEEEEESSSB TTSS S S- EEEEEEEEEEEEES SS SS EEEEEEEEESTT SS S EETTTSSSEEEEEEE:
ExpBur :eebbbbbbbebbbebebebebeeeebeeebeeeeeeeeee-eeebebebbbebebebeebeebeebebebebebbbbeeeeeebbbbeebeeeebeeeee:
Contact :b bbb
queryA 701:VTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARSRAL: 793
: * * * ** * ** *** * ** *** * * *** ** *** *:
4nen_A_1 687:LGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEXXXXXXXXXXDNLGISFSFPGLKSL: 774
SecStr :E SEEEEEEEEEEE SS S SS EEEEEEEEE------------EE STTSS EE TT EEEEE B ---------- EEEEEE TT SSE:
ExpBur :bbeeeeebebebbbebeeeeeeebbebebbbeb------------ebeeeeeeeebebbbbeeeeeebebebbbe----------bebbbebebeeeeeb:
Contact : bb b
queryA 794:RLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVE---MLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
: * * * ** * * *** * * * * * ** ** * * **:
4nen_A_1 775:LVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAXXXXXXXXXXLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGD: 873
SecStr :EETTB EEEEEEEEEE SS BSSEEEEEEEETTEEEE ---------- EEEEEE SSS-SEEEEEEEE SS B TT EEEEEEEEEE TT TT:
ExpBur :bbeeeeebebebebebeeeebebbbbebebeebbebeeee----------eebeeeeeeeeee-eeebbebebeeeebeeeeeeebebbbebeeebebee:
Contact : bbb bbbb b
queryA 891:SVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---VGV: 975
: * *** * ** * * * * * * * * * *** * * * *** * *:
4nen_A_1 874:RLLLTANVSSESNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLCFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMDVEV: 969
SecStr :EEEEEE B SS ---- SS EEEEEEEEEEE EEEEE SSS EEEE TT TT EEEEEEEEEEEE SSS EEEEEEEEEEEEETTEESEEEEEE:
ExpBur :ebebbbebebbeee----eeeeeeeeeeebebebbbebbbeebeeebeebebbeeeeeeeeebebbbebbbebebebebbbbbebbbebeeeebbeebeb:
Contact : b bb bb b b
queryA 976:PQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFHLYG:1069
: * * * ** * * * *** * * * * * * * * * * * * *:
4nen_A_1 970:SHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQLPG:1065
SecStr :E S--SSTT EEEEEE HHHHHHHS -EESTTTSEEEEEEEEEEEE TT EEEEEEEEEEESGGGGGTT SEE-EEEEEEEEEE TTTEEE TT:
ExpBur :ebe--eeeebeeeeeeeeeeeeebeeebeeee-bbeeebbbbbebebebeebbbeebbbbbbebebbbbbbeebeeeeb-ebbbbbebebeeeebebeee:
Contact : b
queryA 1070:SNA:1072
: *:
4nen_A_1 1066:QEA:1068
SecStr : GG:
ExpBur :eee:
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[assembly_id:1]
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