Protein Model on 4neh_A_1_B_1
(TEMPLATE: 
4neh
)Protein Model on 4neh_A_1_B_1
(TEMPLATE: 4neh
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [1084 aa] | Integrin alpha-X :ITAX_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [668 aa] | Integrin beta-2 :ITB2_HUMAN | 47Y(D) 62G(Q) 94Y(S) 97M(L) 114G(T) 116S(H) 118T(E) 120D(G) 121Q(R) 122N 123T(M) 125L 334I 335E 340Q(T) 345F 349L(M) 351S(Q) 354I(F) 368V 373W 401A(D) 403Y 406Y 426R 429H 430M(T) 456I 457G 459Y 484L(H) 486Y 518L(W) 520R 580W(Y) 604E(R) 680H(G) 681R 682T(L) 723S(T) 728S(R) 831K(Y) 833E(A) 843V(L) 844S(T) 865S(H) 866P(L) 867I 869K(R) 931E 935L(K) 936Y 938S(C) 1047S(K) (identity: 37.0 %/37.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4neh_A_1 identity=37.6% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * ** ** * * * * **** ** **** ** * * * ** ** *** * * :
4neh_A_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAADQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98
SecStr : B SSS EEEE STT--TTSEEEEETTTEEEEEEEEEEEETTEEEEEEEE TTT SEEE TT BS BTSEEEEEETTEEEEEEEEEEEEEET:
ExpBur :bbbbeeeebebebebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbbeeeebeebebeebeebeebbbbebbbeeeeeebbbbbbbbbebebe:
Contact : b b b b b b b b
queryA 121:QNTYLSGLCYLFRQNLQGP--MLQGRP-GFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDP: 217
: * ** *** * ** * * *** * *** *** * * * * * ** *** * * * *:
4neh_A_1 99:RNMYLTGLCFLL-----GPTQLTQRLPVSRQECPRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNP: 193
SecStr :TEEEEEEEEEEE----- TTS EEESSS B EEEEEEEE STTS THHHHHHHHHHHHHHHTS TTTEEEEEEEESSSEEEEE HHHHHT SSG:
ExpBur :ebebbbbbbbbb-----beeeeeeebeeeebebeeeebbbbbbbbbbeebeeeebebbbebbebbbebbeeebbbbbbbbbbeeeeebbbbeebeebeeb:
Contact :bbb b
queryA 218:DALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEA-------TDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEF: 310
: ** * * * ** * * *** ** * ** **** * * **** ** * ** * * **** * :
4neh_A_1 194:LSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEH: 293
SecStr :GGTTSS S B HHHHHHHHHHHTTSGGGT SSSEEEEEEEE S BB S HHHHHHHHHHTTEEEEEEE GGGTTSHHHHHHHHHHS SSGGGS:
ExpBur :eeebeebeeeeeebebbebbeebbeebbeeeebbbeebeebbbbbbbbebeebeeebeebbeebeeeebebbbbbbeebeeeeebeebbbebbbeeeeeb:
queryA 311:VKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTW: 410
: * *** * ** **** ** * * ** * **** * ** * *** * **** * :
4neh_A_1 294:IFKVEDFDALKDIQNQLKEKIFAIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-DPTFINMSQENVDMRDSYLGYS-TE: 391
SecStr :EEETT TTHHHHH B B GGG TTT B SSTT EEEEEEEETTEEEEEETTHHHHT EEE TTS- EEE TT GGGTTS TTSE-EE:
ExpBur :bbebeeeebbeeebeeeeebebbeeeeeeeebeebeebbbbbbebbbbbeebbbbbbbbbebebbbbbbbbeee-eeeebebeeeeeebeebebbeb-bb:
Contact : bb b b b b b b b b b b
queryA 411:LPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI----YQRRQLGFEE: 506
:* * ******* * * * * ********* ** **** ** * * ***** * *** * * :
4neh_A_1 392:LALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDA: 489
SecStr :EEESSSSEEEEEEETTGGGT EEEEEE--EETTEEEEEEEEE SSTTS TTSEEEEE TT SSS EEEEEEEEEE SS EEEEEEEE TT E:
ExpBur :bbeeeeebbbbbbbbebeebbbbbbbb--eeeeebeeebebebeeeebbbbbbbbbbebeeeebbbbbbbbbbebeeeeebbbbbbbebbeeeeebeeee:
Contact : b bb bb b b b
queryA 507:VSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA: 603
:* * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * ****:
4neh_A_1 490:V--LYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGA: 587
SecStr :E--E SS TT BTSEEEEEE SSSSS EEEEEETTHHHHTBEEEEE EETTTEE SS SEEEEHHHH SS SBTSSEEEEE SSSSS EEEEEE:
ExpBur :e--bbbeeebeebebbebbbebeebbeeebbbbbbbbbbbeeeebbbbbbbbeeeebbbeeeebbbbbeeeeeebeebbebbbbebebbebbbebbbbbb:
Contact : b b b
queryA 604:ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGR-HELRRNIA: 700
: * * *** * * ***** ** * ** * * * * * ** * * * * * :
4neh_A_1 588:RGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKTRSLSRVRV: 686
SecStr :TTEEEEEEB EEEEEEEEEEESSSB TTTS S SS - EEEEEEEEEEEEES TT S S EEEEEEEEESTT SS S EETTTSSSEEEEEEE:
ExpBur :eebbbbbbbebbbebbeebebeeeebebebbeeeeeeeee-eeebebbbbbebbeebeebeeeeebebebebebbbbeeeeeebbebeeeeeeebebeee:
Contact :b bbb
queryA 701:VTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARSRAL: 793
: * * * ** * ** *** * ** *** * * ******* * * ** *** *:
4neh_A_1 687:LGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSL: 774
SecStr :E SEEEEEEEEEEE S S SS EEEEEEEEE------------EE BGGGTSB EE TT EEEEEE B B SSS B EEEEE TT SSE:
ExpBur :bebeeeebebebbbebeeeeeeebbebebbbeb------------ebeebeebeebebbbbeeeeeebebebbbbbeeeeeeebebebbbebebeeeeeb:
Contact : b b
queryA 794:RLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
: * * * ** * * *** * * * * * * ** ** * * **:
4neh_A_1 775:LVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGD: 873
SecStr :EETT EEEEEEEEE SS EEEEEEEEEEETTEEE SSSS S EEEEEEETTT-TEEEEEEEEEEEEE SS EEEEEEEEEE TT S:
ExpBur :bbeeeeebebebebebeeeebbbbbbebebeebbebeeeeeeeeeeeeeeeebeeeeeeeeee-eeebbebebeeeebeeeeeeebebbbebeeebebee:
Contact : b b bb bbb b
queryA 891:SVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---VGV: 975
: * *** * ** * * * * * * * * * *** * * * *** * *:
4neh_A_1 874:RLLLTANVSSESNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLCFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMDVEV: 969
SecStr :EEEEEEEEE SS ---- S EEEEEEEEEEE EEEEE S S EEEEETT TT EEEEEEEEEEEE SSS EEEEEEEEEEEEETTEESEEEEEE:
ExpBur :ebebbbebebeeee----eeeeeeeeeeebebebbbbbbbeebeebbeebebbeeeeeeeeebebebbbbbebebebebbbbbebbbebeeeebbeebeb:
Contact : b bb b b
queryA 976:PQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFHLYG:1069
: * * * ** * * * *** * * * * * * * * * * * * *:
4neh_A_1 970:SHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQLPG:1065
SecStr :E --SS EEEEE HHHHHHHS -EE TTTSEEEEEEEEEEEE TT EEEEEEEEEEESGGGGGT SEE-EEEEEEEEE TTTEEE TT:
ExpBur :ebe--eeeeeeeeeeeeeeeeeeeeeebeeee-bbeeebbbbbebebebeebbbebebbbbbebebbbbbbeebeeeeb-ebbbbbebebeeeebebeee:
Contact : b
queryA 1070:SNA:1072
: *:
4neh_A_1 1066:QEA:1068
SecStr : GG:
ExpBur :eee:
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[assembly_id:1]
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