Protein Model on 4mmz_A_1_B_1
(TEMPLATE: 
4mmz
)Protein Model on 4mmz_A_1_B_1
(TEMPLATE: 4mmz
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [920 aa] | Integrin alpha-V :ITAV_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [690 aa] | Integrin beta-3 :ITB3_HUMAN | 349L(F) 351S(Q) 354I(F) 368V(P) 373W 403Y 406Y 426R 429H(T) 455Q 456I(M) 457G(A) 459Y 462G(F) 484L 488E(R) 490R(E) 516Y(F) 520R 545L(Y) 583R(Y) 679G(K) 680H(L) 681R(K) 683R(K) 717C(E) 719Q(R) 720D 723S(T) 828S(D) 830R(I) 831K(G) 835L(R) 838H(E) 842P(R) (identity: 25.7 %/29.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4mmz_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425
:** * * * * * * * * * * * **** * ** *:
4mmz_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244
SecStr :S STTTTTT TTSEEEE SSSEEEEEETTHHHHTBEEEEEEHHHHHHT TT SS TT EE GGGTT BTSEEEEE STT S EEEEEET:
ExpBur :eebebebbbebebbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeeebebeeebebeeeeeeeeebebbbbbbbbebeeeeebbbbbbbb:
Contact : b b b b b bb b b
queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518
:* * * * * * * *** * * ****** * * * * * * * :
4mmz_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337
SecStr :THHHHT EEEEE ----TTT EEEEEE SSTTS TTSEEEEE SSSSSS EEE-EEETT EEE SS EEE EEEEEE SSSS EEEEEE SSTT--:
ExpBur :ebeeeebbbbbbb----beebeeeeebebebeebebbbbbbebbbbeeeebbbb-bbbbebebeeeeeeeebbbbbbbbbbeeeeebeeeebebeeee--:
Contact :b b bbb b b b b bbbbb b b
queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605
: *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** :
4mmz_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430
SecStr :S TTSEEEEETTTT SSS EEEEEETT SGGG EEEEEEEETTEEEEEEEEEEE ------- S SSS TTSEEEEEE SSTTSS EEEEE SSS:
ExpBur :bebbbbbbebebbbeeeeebbbbbbbbbbeeebbbbbbbbbeeebbbeeebbebeb-------eeeeeeeebbbbebbebeeebbebebbbbbbbbbbbb:
Contact : b b b b b
queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697
: * *** * ** * * * * * * ** ** ** * * :
4mmz_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525
SecStr :EEEEE B EEEEEEEEEEE SEE TT EE SSS EE B EEEEEEEEE SSS S-----EEEEEEEEES SSS SSS EE TTT SSEEEEEE:
ExpBur :bbbbbbbbbbbebebebebeeeebebeeeeeebeeeeeebbebebebbbebebeeebee-----ebbbebebbbbeeeeeeeeebbbbbeeeeeebeeeb:
Contact : bbb b bb
queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
: * * * * ** * * * * *** * * * **** * * ** :
4mmz_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614
SecStr :EEESSS EEEEE EE TTSSS SS EEEEEEEEE-------- S TTSS EE SS SEEEEEEEE S-- TTTTS EEEEEE- S :
ExpBur :ebeeeeeeeeeebbbbbeeeeebebeeebbbbbbebee--------eeeeeeebeebebeeeeeeeeebeeebbbbee--beeeeebebebebebe-eee:
Contact : b bb b
queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
: * * * ** * * * * ** * * * * *** * * :
4mmz_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709
SecStr : EEETTS EEEEEEEEEE SS BTTEEEEEE TT EE - S SSS EEEEEE SS--- EEEEEEEESSB- SS EEEEEEEEE SS :
ExpBur :eebebeeebebbbebebbbeeebbbebebbbebbebbebeeb-beeeeebeebeeeeeeeee---eeebebebeeeb-eeeeeeebbbebbbeeeeeeee:
Contact : b bb b b b
queryA 891:SVELHANVTCNN: 902
:** *:
4mmz_A_1 710:SVKFDLQIQSSN: 721
SecStr :EEEEEEEEE S :
ExpBur :ebebebebebeb:
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[assembly_id:1]
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