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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [582 aa] | Integrin alpha-4 :ITA4_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [375 aa] | Integrin beta-7 :ITB7_HUMAN | 345F 354I 368V(P) 373W 403Y 406Y 426R(Q) 429H(Q) 456I(L) 459Y 484L(M) 486Y(S) 488E(I) 489Q(R) 490R(E) 516Y 545L(Q) (identity: 41.2 %/34.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3v4p_A_1 identity=34.7% |
queryA 322:DLFTELQKKIYVIEGTSKQD-LTSFNMELSS--SGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAG-YLGYTVTWLPSR-QK: 416 :** *** * * ** * * *** * ** * * * * * **** * * * : 3v4p_A_1 138:DLRTELSKRI----APCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVY--NITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQH: 231 SecStr :T GGG EEE---- TT TT SSTTTTT BTSSEEE SSEEEEEETTHHHHTBEEEEE--ETTTTEEEE TT S TT BTSSEEEE SS SS: ExpBur :ebebeeeeeb----ebbeeeeeeeebeeebbbebbebbebbeebbbbbbbbbeeebbbbbbb--eeeeeeebbbeeeeeebeeebebbebbbbbebeeee: Contact : b b b b b b b queryA 417:TSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGF---EEVSELQGD: 513 :* *** * * * ***** * ** ** ** *** **** * * * * : 3v4p_A_1 232:TTEVVGGAPQHEQIGKAYIFSIDEK--ELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLL-VGAPMQSTIREEGRVFVYINSGSGAVMNAMETNLVGS: 328 SecStr : EEEEEETTGGGT EEEEEEE SS--SEEEEEEEE SSTT TTSEEEEE SSSSS EEE-EEETT SSS EEEEEEE SSSS EEE SS B TT: ExpBur :eebbbbbbbebeebbbbbbbbeeee--bbeeeeebebeeeebbbbbbbbbbbbbeeeebbbb-bbbbbbeeeebbbbbbbbbbeeeebebeeeeeebebe: Contact : b b b b b b bbb queryA 514:PGYPLGRFGEAITALTDINGDGLVDVAVGAPLEE--QGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA--ESQMIV: 609 : * **** * * ** ** *** *** * *** ** *** * * ****** * ** ** * * * ****** : 3v4p_A_1 329:DKYA-ARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVL: 427 SecStr : TT- TTSEEE STT SSS EEEEETTHHHHT EEEEE EETTEE SS SEEEEGGGT TT SEEEEEEEEE SS SSS EEEEEETTTTEEEE: ExpBur :eeeb-bbbbebbbbbbebbeeeeebbbbbbbebeeeebbbbbbbbbeebbbeeebbbbebeeeeeebbbbbbbbbbebebbebebebbbbbbbebbbbbb: Contact : b b b bb queryA 610:LSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGRLVANLTYTLQLDGHRTRR---RGLFP--GGRHELRRNIAVTT-: 703 :* **** * * * * ** * * * * * ** * * * * * * : 3v4p_A_1 428:LRTRPVVIVDASLSH-PESVNRTKFDCVENGWPSV--CIDLTLCFSYKG--KEVPGYIV--LFYNMSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSR: 520 SecStr :E B EEEEEEEEE - SB TT S BTTB --EEEEEEEEEEE --SS SEEE--EEEEEESS S SS SEE STTTT SEEEEEEEEESS: ExpBur :bbbebbbbbebebee-eeebeeeeeebeeeeeebb--bbebbbbbebee--eeeeeebe--bebebebbeeeeeeeeebbbbeeeeeeeebeeebebeee: queryA 704:SMSCTDFSFHFPVCVQDLISPINVSLNFSL: 733 : * * * ** *: 3v4p_A_1 521:EANCRTHQAFMRKDVRDILTPIQIEAAYHL: 550 SecStr :S EEEEEEEEE SS SS EEEEEEEEE: ExpBur :eeeeeebebbbeeeeeeeeeebebebebeb: |