[pdbjlvh2]Protein Model on 3fcu_E_1_F

Protein Model on 3fcu_E_1_F_1 (TEMPLATE: 3fcu )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ITAL_HUMAN)	E 1 (E)	polymer(polypeptide(L)) [452 aa]	Integrin, alpha 2b :Q17R67_HUMAN
2	b		F 1 (F)	polymer(polypeptide(L)) [455 aa]	Integrin beta-3 :ITB3_HUMAN	400R(F) 401A(D) 403Y 406Y 426R(T) 429H(W) 456I(M) 457G(A) 459Y 462G(H) 484L 487G(M) 516Y 520R 545L(Y) 583R(F) (identity: 37.5 %/37.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3fcu_E_1 identity=37.7%

queryA       396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491
                : **   ** ** *          *     ***      * *                   * *  ****      **  **   **  **** * * *  :
3fcu_E_1     227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319
SecStr          : GGGTT  TTSEEEEE  SS TTS EEEEEETTHHHHT EEEEE T-----T  EEEEEE SSTTS TTSEEEEE  SSSSS EEE-EEETT- EEE GG:    
ExpBur          :eeebeebebbebbbebbbeeeeeeebbbbbbbbbbeebbbbbbbee-----ebeeebebebebeebebbbbbbbbbbbeeeeebbb-bbbbe-beeeeee:    
Contact         :    bb b  b                     b  bb                          bb b  b                     b  b     

queryA       492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578
                :      ***           **      * *   *  **** **  * *   **  * ** **       * *  * *   **   ***         * :
3fcu_E_1     320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLD-SPFPTGS: 415
SecStr          :G EEE BEEEEE   STT    S SEE-EE  STT--  BTSEEEEEE SS SSS EEEEEETT SSSSSBEEEEE EETTEE SS SEEEE-  S TT :    
ExpBur          :eeebebbbbbbbbbeeeeeebeeeeee-bebeeee--bebbbbbbebbebeeeeeebbbbbbbebbeeeebbbbbbbbeeebbeeeeebebe-bebeeeb:    
Contact         :  b b                             b   b                        b                                    

queryA       579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRP: 614
                :  ** *  *  *    *  *  ***    *  *    *:
3fcu_E_1     416:A-FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQP: 452
SecStr          : -BTSEEEEEE SS SSS EEEEEETTTTEEEEE B  :    
ExpBur          :b-bbebbebebebeeeeebbbbbbbeebbebbbbbbee:    
Contact         :    b                    b

Protein Model on 3fcu_E_1_F_1 (TEMPLATE: 3fcu )

Input Residue Numbers for Focused Sites