Protein Model on 1rd4_D_1 (TEMPLATE: 1rd4 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description
1 a A(ITAL_HUMAN) D 1 (D) polymer(polypeptide(L)) [184 aa] Integrin alpha-L :ITAL_HUMAN
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1rd4_D_1 identity=100.0%
queryA       153:GNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGAR: 252
                :****************************************************************************************************:
1rd4_D_1       8:GNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGAR: 107
SecStr          :  EEEEEEEE BTTS HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSSEEEEE HHHHHHH  HHHHTSS     B   HHHHHHHHHHHTS GGGT  :    
ExpBur          :eebbbbbbbbbbeebeeebbeebbebbbebbeebeeeeebbbbbbbbeeeeebbbbeebeeeeebebbbeebebeeeebbbbbbbeebbeebbeeeeebb:    

queryA       253:PDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKKIYVIEG: 336
                :************************************************************************************:
1rd4_D_1     108:PDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKKIYVIEG: 191
SecStr          :TTSEEEEEEEESS  S     GGGTTSEEEEEEESGGG SHHHHHTTTTTS S HHHHEEEESSTTHHHHHHHHHHTT      :    
ExpBur          :eebeebbbbbbbbeeeeeeebeebeebebebbbbbeebeeeebeeebeebbbeeeeebbeebeebeebeebbeeeeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123