[pdbjlvh2]Protein Model on 1n9z_A

Protein Model on 1n9z_A_1 (TEMPLATE: 1n9z )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(ITAL_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [184 aa]	Integrin alpha-M :ITAM_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1n9z_A_1 identity=34.5%

queryA       156:DLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDA: 255
                :*  ** *** *  *  *     *   **  *      *   * *      * *        *  * *     *  * *   *  *  * *    ***  *:
1n9z_A_1       7:DIAFLIDGSGSIIPHDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEEFRIHFTFKEFQNNPNPRSLVKPITQLLGRTHTATGIRKVVRELFNITNGARKNA: 106
SecStr          :EEEEEEE STTS HHHHHHHHHHHHHHHHHT  SSEEEEEEEESSSEEEEE HHHHHH   HHHHHTT     S B HHHHHHHHHHHTS TTTT  SS :    
ExpBur          :bbbbbbbbbeebeeebbebbbebbbebbeebeeeebbbbbbbbbeeeeeebbbeebeeeeebeebbeebeeeeeebbbbbbbeebbeebbeeeebbeeeb:    

queryA       256:TKVLIIITDGEATDS--GNIDAAKD-----IIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQK: 329
                : * *  *****      *  *          *** ** *  *    *   *   ****    *     ** **     *  :
1n9z_A_1     107:FKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEALKTIQNQLRE: 187
SecStr          :EEEEEEEE S  BB SS GGGTHHHHHHTT EEEEEE GGGSS HHHHHHHHHHS SSGGGSEEETT THHHHHHHHHTT :    
ExpBur          :eebbbbbbbbeeeebebbbeebbebbeeeebebbbbbbeebeeeeebeebbeebbbeeeeebbbebeeeebbeebeebbee:

Protein Model on 1n9z_A_1 (TEMPLATE: 1n9z )

Input Residue Numbers for Focused Sites