[pdbjlvh2]Protein Model on 8dpu_J_1_OA

Protein Model on 8dpu_J_1_OA_1 (TEMPLATE: 8dpu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IL6RA_HUMAN)	J 1 (J)	polymer(polypeptide(L)) [298 aa]	Interleukin-6 receptor subunit beta :IL6RB_HUMAN
2	b		OA 1 (J)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8dpu_J_1 identity=28.5%

queryA       106:VHLLVDVPPEEPQ-LSCFRKSPLSNVVCEW-GPRST---PSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCV----AS: 196
                :       *** *  ***          *** * * *      * *      **    *                **        *  * *   *      :
8dpu_J_1      97:ITIISGLPPEKPKNLSCIVNEG-KKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA----------KRDTPTSCTVDY----STVYFVNIEVWVEAEN: 181
SecStr          :EEEEEE      EEEEEEEETT-S  EEEEE  S  SS  EEEEEEEETTEE   EE ---------- SS TTEEE SS----   TTS EEEEEEEEE:    
ExpBur          :bebebbeebeebeebebbbbbe-eebebebeeeeebebeeebbbbbeeeeeeeeebee----------eeeeeebbebeb----ebeeeeebebbbebeb:    

queryA       197:SVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDL---QHHCVIHDAWSGLRHVVQLR: 293
                :  *   *    *       * ** *  *         *  **  *     *   *     **     *       *           *       *   *:
8dpu_J_1     182:ALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSI--KSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIR: 279
SecStr          :TTEEEE   EEE GGGSEE    EEEE     SS SEEEEEEE  GG--GGTS EEEEEEEEETT SS EE  GGGG S  SEEEEES  TT EEEEEEE:    
ExpBur          :eeeeeebeeeebbbbeebbbeebeebebeebeeeeeebebebebbeb--eeebebebbbbebeeeeeeeeebeeeebeeeeeebebeebeeeeebbbebe:    

queryA       294:AQEEFGQGEWSEWSPEAMGTPW: 315
                :   * * * ** ** ** *   :
8dpu_J_1     280:CMKEDGKGYWSDWSEEASGITY: 301
SecStr          :EEETTS S        EEEE  :    
ExpBur          :bbbeeeeeeebeebeebebebe:

Protein Model on 8dpu_J_1_OA_1 (TEMPLATE: 8dpu )

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