Protein Model on 8d7r_B_1_A_1 (TEMPLATE: 8d7r )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RA_HUMAN) B 1 (C) polymer(polypeptide(L)) [199 aa] Ciliary neurotrophic factor receptor subunit alpha :CNTFR_HUMAN
2 b A 1 (D) polymer(polypeptide(L)) [178 aa] Cardiotrophin-like cytokine factor 1 :CLCF1_HUMAN 126P(Y) 181P(M) 183G(L) 184D(F) 185S 186S(T) 211C(F) 245N(D) 247S(E) 248F(S) 249Y(F) 250R(P) 296E(D) 297E(N) 299G(E) 300Q(I) (identity: 6.2 %/34.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8d7r_B_1 identity=34.7%
queryA       112:VPPEEPQLSCFRKSPLSNVVCEWG---PRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSF-YIVSMCVASSVGSKFSKTQT: 207
                : ** ** ***          * *    *   *      **   *            *       *  *        *   * **  *    *       *:
8d7r_B_1      85:LPPREPVLSCRSNTYPKGFYCSWHLPTPTYIPNTFNVTVLHGSKIMV---------CE-KDPALKNRCHIRYMHLFSTIKYKVSISVSNALGHN-ATAIT: 173
SecStr          :      B   BBS SSS BB   B SS  SS      EE TTT  B ---------  -   SSSS   B    SS     EEEEE   SS   -EEEEE:    
ExpBur          :eebeebebebebbbbeebbebebebeeeeeeeeeeeeebebeeeebe---------be-eeeeeebebebebeeeeeeeebebebebebeeeee-ebeee:    
Contact         :              b                                                         b bbbb b                    

queryA       208:FQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSW-NSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEW: 306
                :*    *  **** *     *  *** * **** *  *       * * ****             *   *  * **  *     *  *      * ** *:
8d7r_B_1     174:FDEFTIVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSDGTAH-TITDAYAGKEYIIQVAAKDN-EIGTWSDW: 271
SecStr          :  TTTSB        EEEE SS TT EEEE    SSS  TTTS B  EEEEEETTT    EEE  S S E-EESS  SSS EEEEE   BS-SSS     :    
ExpBur          :bebeebbebeebeebeeeebeeeeeebebebeebeebeebeeeebebbbbbbbeeeeeeeeeebeeeeee-ebeebeeeeebbbbbbbbbe-ebeeebee:    
Contact         :   b                                  b bbbb                                             bb bb      

queryA       307:SPEAMGTPWTE: 317
                :*  *  *****:
8d7r_B_1     272:SVAAHATPWTE: 282
SecStr          : S   B     :    
ExpBur          :beebebebeee:    


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