CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IL6RA_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [293 aa] | Interleukin-12 subunit beta :IL12B_HUMAN | |
2 | b | G 1 (G) | polymer(polypeptide(L)) [125 aa] | Nanobody 124C4 | 126P(Y) 127L(S) 129N(R) 172Q 181P 220A(K) 239Q(E) 242H(D) 243S(T) 244W 245N(S) 246S(T) 249Y(F) (identity: 23.1 %/27.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4grw_B_1 identity=27.8% |
queryA 39:PGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAG--------------TVHLLVD--VPPEEPQLSCF: 122 :** * *** ** * * * * * * * * * * * * * * * * : 4grw_B_1 42:PGEMVVLTCDT--PEEDG-ITWTL------DQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCE: 132 SecStr : EEEEEE S--S SS- EEEE------TT EESSEEEEEE SGGG EEEEEEETTEEEEEEEEEEEEEETTEE SS SSSSS EEE: ExpBur :eeeebebebeb--eeeee-bebbb------eeeeeeeeeeeebebebeeeeebbebbbeeeeeeebebebbbbeeeeeeebeebbeebeeeeeebbbebe: queryA 123:RKSPLSNVVCEW----------------GPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQ: 206 : * * * * * * * ** * * * * * * * * * * : 4grw_B_1 133:AKNYSGRFTCWWLTTISTDLTFSVKSSRGXXXPQGVTCGAATLSAERVRXXNKEY----EYSVECQEDS---ACPAAEESLPIEVMVDAVHKLKYENYTS: 225 SecStr :BSSSSSEEEEEEEES SSEEEEEEEEE --- EEE EEEEEE -- EE----EEEEEEEETT--- TTS S EEEEEEEEETTEEEEEEE: ExpBur :bebbebebebbbbbebeeebebebebbbe---eebbebeeeeeeeeeee--eebe----bbbbebebee---eeeeeebeeebebebbbbeeeebbebee: Contact : bb b b b queryA 207:TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNS--SFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWS: 304 : * * **** * * * * * * * * * * * ** *** **: 4grw_B_1 226:SFFIRDIIKPDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGXXXXXXXDRVFTDKTSATVI----CRKNASISVRAQDRYYSSSWS: 320 SecStr :EE GGGSB EEEEEEE -SSTTEEEEEEE TTS S TTTS EEEEEEEE ------- EEEESSSEEEEE---- TT EEEEEEEESSS : ExpBur :ebebeebbebeebeebeeeee-eeeeebebbbebbeebbeeeeebbbbbbbbbee-------eeeebeeebbebe----beeebebbbebbbeeeebeeb: Contact : b b bbbbbbb b queryA 305:EWS: 307 :** : 4grw_B_1 321:EWA: 323 SecStr : E: ExpBur :eeb: |