[pdbjlvh2]Protein Model on 3npz_C

Protein Model on 3npz_C_1 (TEMPLATE: 3npz )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(IL6RA_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [199 aa]	Prolactin receptor :PRLR_RAT

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3npz_C_1 identity=25.4%

queryA       113:PPEEPQLSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDS-SFYIVSMCVASSVGSKFSKTQTFQGC: 211
                :**  *     *        * * *     * *   *   *      *     *     *   **            **         **  *        :
3npz_C_1       3:PPGKPEIHKCRSPDKETFTCWWNPGTDGGLPTNYSLTYSK----EGEKTTYECPDYKTSGPNSCFFSKQYTSIWKIYIITVNATNQMGSSSSDPLYVDVT:  98
SecStr          :      EEEEEBSSSS EEEEE     TTS  EEEEEE B----TTS   EE S SSSS SSEEEE TTT  SSS EEEEEEEEETTEE     EEE GG:    
ExpBur          :bebebebeebbbeeeebbbbebeebeeeebebebebbbbb----eeeeeeeebebeeeeeeebbebeeeebbeeeebbbbbbbebeeeeeebeeeebebe:    

queryA       212:GILQPDPPANIT--VTAVARNPRWLSVTWQDP--HSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHC--VIHDAWSGLRHVVQLRAQEEFGQGEWSE: 305
                : *  * ** * *  *         * * *  *              * *   *       *      *       *   *    ** *       * ** :
3npz_C_1      99:YIVEPEPPRNLTLEVKQXXXKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEXXE---EWEIHFTGHQTQFKVFDLYPGQKYLVQTRCKPD--HGYWSR: 193
SecStr          :GSB     EEEEEEEE ---   EEEEEEE  S TTTTTT    EEEEEEE  -- ---  EEEEESS SEEEE    TT EEEEEEEEE S--S     :    
ExpBur          :ebbebebbeebebeeee---eeebbbbebeebebeebeeeeeebebbbebbee--e---eeeeeebeeeeebebeebeeeeebebbbbbebe--ebeebe:    

queryA       306:WSPEA: 310
                :** * :
3npz_C_1     194:WSQES: 198
SecStr          :    E:    
ExpBur          :ebeee:

Protein Model on 3npz_C_1 (TEMPLATE: 3npz )

Input Residue Numbers for Focused Sites