Protein Model on 7xy4_B_1_HA_1 (TEMPLATE: 7xy4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS2) B 1 (B) polymer(polypeptide(L)) [1060 aa] Spike glycoprotein :SPIKE_SARS2
2 b HA 1 (C) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 558K (identity: 100.0 %/93.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7xy4_B_1 identity=93.6%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :********************************************************       *************************************:
7xy4_B_1       1:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 100
SecStr          :     SS       EEEE S  EE  SS    S EEEEEEEE  TTEEEEEEEEB ------- B     EE SS EEEEE  SS     B EESSSSTT:    
ExpBur          :eeeeeeeeeebeeeeeebebbbbbebeeeeeeeeeeebeebbbbbeeebeebbbee-------eebbbeebebeebbbbbbebebbbbbbbbbbeebeee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7xy4_B_1     101:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 200
SecStr          :S EEEEE  SSSEEEEEE     SS    B   SS  TT B   TT S  SS  EEEEE          SSS    EEEEE BSSSBB EEEEE     S:    
ExpBur          :bbbbbbbbeeeebbbebbbbeebebbbbbbeebeeeeeeebeeeebeeeeeeeeeeeeeeeeeeeeebeeeeeeebbbbbbbeeeeebebbbeebeeeee:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :**********************************       ***********************************************************:
7xy4_B_1     201:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSXXXXXXXSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 300
SecStr          :SSSS S  EEEEEE  B     SEE         -------  S    SEEEEE B EEEEEEEEE SSS EEEEEESTTSHHHHHHHHHTSS   SEEE:    
ExpBur          :eeeeeeeebbeeeeebebeeebeebbbbbbbbee-------eeeebbbebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeeeebeeeee:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :****************************************************************************************************:
7xy4_B_1     301:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 400
SecStr          :EEEE         EE     SB S HHHHT SS  BTTB EEEEE SSB  SHHHHT   EEEEEESSS TTTTTTS BSEEEEEEEEEETTSGGG STT:    
ExpBur          :ebeeeeeeeeeebbbbbeeeeebebeebbeeeebbbbbebeeeebeebbbebeebeeeeeeeeeebeebeeeebeeebbbebebbbbbbeeebbeebbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7xy4_B_1     401:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 500
SecStr          :  STTTTTT    TT  EEEEEEE HHHH  SS     B      S   TT         B SSS  SS  BTTB     B    TTS GGG EEEEEEE:    
ExpBur          :eeeebbeebbebbeebebbbbbbebbeebeeeebbeebeebeebeeebeeeeeeeeeeeeeeeeeebeeeeeeebeebbeebebeeeeeeeebbebbbbb:    

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :****************************************************************************************************:
7xy4_B_1     501:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 600
SecStr          :EEE SSS   B  S        SSEE  EETTB   EEEEE      TT   EE TTSSEEEEE SSS  EEEEE    SEEEEEE  TTT S  EEEEE:    
ExpBur          :bbeeeeeebebbbeeeeeeebeeebbebbbbbbebebebeebeeebeeeeeebeeeeeeeebbbbeeeeeebebeebeeebbbbbbbbeeebeebbbbee:    
Contact         :                                            b                                                       

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*******                    ************************************            *************************:
7xy4_B_1     601:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 700
SecStr          :T  S   -------------------- EEE SSEEEES EEES     SEE SSSEEEEEE ------------  EEEEEE            SSEEE:    
ExpBur          :ebeeeee--------------------eeeebebbbbeebeebeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7xy4_B_1     701:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 800
SecStr          :EEEEEEEEE  EEEE    EEEE HHHHHSTT HHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHH   SS     SS   TT   TTTS  TTSSS:    
ExpBur          :bbeebebebeeebbbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbeebbebbeebbeebeeebeeeeeeebeebebeebbeeeeeeb:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :**************                          ************************************************************:
7xy4_B_1     801:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 900
SecStr          :   HHHHHHHHS  --------------------------  SSEEEE  SS HHHHHHHHHHHHHHHHHT SSTTSSS     HHHHHHHHHHHHT  T:    
ExpBur          :ebbebbebbbeebe--------------------------eeebbeeeeeebeeeebbeebebbbbbbbebbebbeeeeeeebebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :****************************************************************************************************:
7xy4_B_1     901:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1000
SecStr          :HHHHTSHHHHHHHHHHHHHHHHHHHHH TTTTHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebeeebeeeeeebeebeebeeebeebbeebeeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7xy4_B_1    1001:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1100
SecStr          :HHHHHHHHHHHHHHHHHHTTSS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSS EEEESSSEEEESSSSEEEE SSS   E:    
ExpBur          :ebeebeebbeebbebbeebbbeebeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeebbbbbeeeebbbbbebbbeee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPEL:1145
                :********************************:
7xy4_B_1    1101:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPEL:1132
SecStr          :E  SSSEEE S TTTSTT EE     TTTTT :    
ExpBur          :ebbeeebeeeeebeeeeeeeebebeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123