Protein Model on 7wgy_C_1_B_1
(TEMPLATE: 
7wgy
)Protein Model on 7wgy_C_1_B_1
(TEMPLATE: 7wgy
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS2) | C 1 (C) | polymer(polypeptide(L)) [1025 aa] | Spike glycoprotein :SPIKE_SARS2 | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [821 aa] | Spike glycoprotein :SPIKE_SARS2 | 41K 42V 43F 225P 282N 427D 737D 755Q 756Y 757G 758S 759F 765R 784Q 787Q 788I 789Y 790K 796D 797F 849L 854K 855F 860V 861L 863P 864L 866T 869M 872Q 873Y 886W 890A 894L 895Q 896I 897P 900M 904Y 913Q 914N 917Y 918E 920Q 963V 966L 967S 975S 994D 1019R 1030S 1031E 1113Q 1141L 1144E (identity: 100.0 %/91.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7wgy_C_1 identity=91.7% |
queryA 26:PAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATN: 125
:****************************************** ***********************************************:
7wgy_C_1 13:PAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAXXXXXXXXXXXFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATN: 112
SecStr : EEEE SS EE S SS EEEEEEEE TT EEEEEE ----------- EEE SSEEEEEEEESSS EEEEEEESS STTS EEEEEE SSE:
ExpBur :eeebebebbbbbebeeeeeeeeeeebeeebbbbeeebebbee-----------eebeebebeebbbbbbbbeeebbebbbbbeebeeeeebbbbbeeeee:
Contact : bbb
queryA 126:VVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEP: 225
:****************** ******************** ****************************************:
7wgy_C_1 113:VVIKVCEFQFCNDPFLGVXXXXXXXXXXXXEFRVYSSANNCTFEYVSQPFXXXXXXXXXXFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEP: 212
SecStr :EEEEEE B S EE ------------ B SBS EEEEEEE ---------- EEEEEEEEE SSEEEEEEEEES SSS S EEEE:
ExpBur :bbbbbbebebeeebebee------------eeebeeeeeeeeeeeebeee----------eeebebbbbbbeeeebbbbeeebeebeeeebeeeeebbee:
Contact : b
queryA 226:LVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTES: 325
:********************* ***************************************************************:
7wgy_C_1 213:LVDLPIGINITRFQTLLALHRXXXXXXXXXXXXXXXXAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTES: 312
SecStr :EEEEE EEEEEEEE ---------------- EEEEEE EEEEEEEEE SSS EEEEEETTS HHHHHHHHHTSSS SEEEE E:
ExpBur :eeebebebebeebbbbbbeee----------------ebbbbbebeeeebbbebeeeeebeebbbbeeeebbebeeeeeebebeebeeebeeeeeebeee:
Contact : b
queryA 326:IVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKL: 425
:****************************************************************************************************:
7wgy_C_1 313:IVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKL: 412
SecStr :EEE HHHHHT S GGG EEEE SEE HHHHHH SEEEEESS GGGGGS EEEEEEEEEEE GGGGGTSSTT HHHHHT :
ExpBur :bebbeeeeeeeebeebbeeeebebbbebeeeebeebebbbeebeeeeeeeeeebeebeeeebbeebbeebebbbbbbbbebeebbeeeeebebbbebbeb:
queryA 426:PDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVC: 525
:****************************************************************************************************:
7wgy_C_1 413:PDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVC: 512
SecStr : TT EEEEEEE HHHH TT B S EEE SS TT SSS SS BTTB SEEE B TTS TTTS EEEEEEEEEESSS SEE:
ExpBur :eeebebbbbbbebbeebbeeebbeebeebeeeeeebeeeeebeeeeeeeeeeeeeeeeeeeebeebbeebebeeeeeebeebbbbbbbbbeeeeeebebb:
Contact : b
queryA 526:GPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIH: 625
:************************************************************************************************** :
7wgy_C_1 513:GPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAXX: 612
SecStr : S SSEEEEEETTEEEEEEEEE S TT EEE TT EEEEE TTT EEEEE EEEEE TTT EEEEES SSS --:
ExpBur :beeeeeeebeeebbbbebbbbeeebebeeeeeebeeeebeeeeeeeebebbbbeeeeebbebeeeeebebbbbbbbbeebeeebbbbeeeeeeeeeee--:
queryA 626:ADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTE: 725
: ************************************ *************************************:
7wgy_C_1 613:XXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXX----XXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTE: 708
SecStr :--------------- EEEETTEEEES EEEEEEE SEEEETTEEEEEE ------------ EEEEEEE TTEEEE EEEEEEEEE:
ExpBur :---------------eeeebeebbbeebeeeeeeeeeebebeeebbbeeee------------eebbbbbeeeeeeeeeeeeeeeeeebbeebebebeee:
queryA 726:ILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNK: 825
:****************************************************************************************************:
7wgy_C_1 709:ILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNK: 808
SecStr :EEE EEEE HHHHHH S HHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHH SS SS STT TTTS SS SS HHHHHHHHH:
ExpBur :bbbbbbebbebebeebbbeeeeebeebbeeeeeebeebeeebeebbeebeebbeebbbebeeeeeebeeeebeebebeebbeeeeeeeeebebbeebbee:
Contact : b bbbbb b b bbbb bb
queryA 826:VTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIAN: 925
:*** ******************************************************************************:
7wgy_C_1 809:VTLXXXXXXXXXXXXXXXXXXXDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIAN: 908
SecStr : ------------------- HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHHTTGGGTSS HHHHHHHHHHTTT THHHHHHHHHHHH:
ExpBur :bee-------------------eeeebbeeebbeeeeeeeeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbe:
Contact : b bb bb bb b b bb b b bbbb b b bb bb b
queryA 926:QFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLA:1025
:****************************************************************************************************:
7wgy_C_1 909:QFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLA:1008
SecStr :HHHHHHHHHHHHHHH GGGHHHHHHHHHHHHHHHHHHHGGG TT S SSHHHHHHHS TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :ebeebbeebeeebeeeeeebeebeebbeebeebbeebbeeeeeeeebebeebeebeeeeeeeebeeebeebbebbbebbeebbeebeeebeebeebbeeb:
Contact : b bb b b b
queryA 1026:ATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGN:1125
:****************************************************************************************************:
7wgy_C_1 1009:ATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGN:1108
SecStr :HHHHHHHTTS STTTTSSSEEEEEEEEEETTEEEEEEEEEEEE EEEE BS EESSSEEEEESSSEEEE SS EEEE SSS B SSSEEEEEE:
ExpBur :bebbeebbebebeeeebbeeeebbbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebebbbeeeeebbbbebbeeeeebbeeebeeeee:
Contact : bb b
queryA 1126:CDVVIGIVNNTVYDPLQPELDS:1147
:**********************:
7wgy_C_1 1109:CDVVIGIVNNTVYDPLQPELDS:1130
SecStr :SSSSSS EE THHHHHT :
ExpBur :beeeeeeeeeebeeeeeeeeee:
Contact : b b
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