Protein Model on 7cwt_A_1_E_1 (TEMPLATE: 7cwt )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS2) A 1 (A) polymer(polypeptide(L)) [1065 aa] Spike glycoprotein :SPIKE_SARS2
2 b E 1 (E) polymer(polypeptide(L)) [118 aa] Heavy chain Fab of HB27 437N 439N 440N 445V 498Q 499P 500T 501N 502G 503V 505Y 506Q (identity: 100.0 %/93.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7cwt_A_1 identity=93.9%
queryA        14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
                :****************************************************************************************************:
7cwt_A_1       1:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 100
SecStr          :          S   B  BSS  EE   S    S EEEEEEEE  SSB  EEEEEEEE SSS  EEE    EE  S EEEEE  SS  EEEE  BSSSSSS:    
ExpBur          :eeeeeeeeeeeeeeebebbbbbbbebeeeeeeeeeeeeeeebbbbeeebbbbbbbeeeeeeeeeebebeebebeebbbbbbbbeeebbbbbbbbeebbee:    

queryA       114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
                :****************************************************************************************************:
7cwt_A_1     101:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 200
SecStr          :S EEE    SS B  EEEEEEE SS  EEEEE SSTT EEEESTTTEEEEEEEEEE  BS SS     SSSS TTEEEEEEEEETTEEEEEEEEE   SS:    
ExpBur          :eebbbbbbeeeebebbbbebebbebbbbbbeeeeeeeeeebbeeebbeeeeeeeeeeeeebbbeeeeeeebeeebbbbbbbbbeeeebbbbbeeeebeee:    

queryA       214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
                :**************************************    **********************************************************:
7cwt_A_1     201:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPXXXXSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 300
SecStr          :SS  S   EEEEEEEEE      EE EEEEE    S  ----     S EEEEEEE EEEEEEEE  TTS    EEESTTSTTTTTTTTS  SS  SEEE:    
ExpBur          :ebbeeeebbbeeebebebebebeebbbbbbbeeeeeee----eeebeeebbbbbbebeeeebbbebeeebebebbbbbeeeebbebbbeeeebebeebeb:    

queryA       314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
                :**************       *******************************************************************************:
7cwt_A_1     301:QTSNFRVQPTESIVXXXXXXXLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 400
SecStr          :EEEEEE     EE -------   HHHHTT S    SSS  EEEE SS   SHHHHHHT SSEEEESS  HHHHHHS BS EEEEEEEEEHHHHHH  TT:    
ExpBur          :ebeebeeeeeeebe-------ebebeebbeeeebebbebbeeeebeebebebbebeeeeebeeeebeebebeebeeeebbbbebbbbbbebebbebbbee:    

queryA       414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
                :****************************************************************************************************:
7cwt_A_1     401:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 500
SecStr          :   HHHHTT    SS   EEEEEE TTTTS SS     EEES  SS   TT      S B  SSS  TTS  TT B SEEE    TT  TTTSEEEEEEE:    
ExpBur          :eebebbebbbbbbeeeebbbbbbebbeebbeeebeeebebbeeeeeebeebeebeeeebeeebeeebeeeeeeebeebbeebebeeebeeeebbbbbbbb:    
Contact         :                       b bb    b                                                    bbbbbb bb       

queryA       514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
                :************      **********************************************************************************:
7cwt_A_1     501:SFELLHAPATVCXXXXXXNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 600
SecStr          :EE  SSS  SB ------    SSEEEEEETTEEEEEEEEE      TT  B   TTS   EEE SSS  EEEEE   EEEEEEEES TTT S  EEEEE:    
ExpBur          :bbeeeeeeeebe------ebbeeebbebebeeeeeebebeebeeebeeeeeebeeeeeebebbbbeeeeeebebeebeebbbbbbbbbbeebeebbbbbe:    

queryA       614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
                :*******                    ************************************            *************************:
7cwt_A_1     601:DVNCTEVXXXXXXXXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 700
SecStr          :T  SS  -------------------- EEE SSEEEES EE SS  B SEEEETTEEE S  ------------    EEEE B S        TTEEE:    
ExpBur          :ebebeee--------------------eebebeebbbeebeeeeeeeeeebebeeebbbbbee------------eeebbbbeeeeeeeeeeeeeeeeee:    

queryA       714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
                :****************************************************************************************************:
7cwt_A_1     701:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 800
SecStr          :EES EEEEEEEEEEE     EEE HHHHHS S HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH   SS     SS  SSS   TTTS  TTSSS:    
ExpBur          :bbbebebebeebbbbbbbbbbbbebeebbbeebeebbebbeeeeeebeebeebbeebbeebbebbeebbbebeeebebeeeeebeebebebbbeeeeeee:    

queryA       814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
                :**************                    ******************************************************************:
7cwt_A_1     801:KRSFIEDLLFNKVTXXXXXXXXXXXXXXXXXXXXDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 900
SecStr          :   HHHHHHHHH  -------------------- TTTHHHHTTEEE   SS HHHHHHHHHHHHHHHHHHTTGGGSSS     HHHHHHHHHHHHT  T:    
ExpBur          :eebebbbbbbeebe--------------------eeeeebeeebbeeeeeebeeeebbebbbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebee:    

queryA       914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
                :****************************************************************************************************:
7cwt_A_1     901:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1000
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHHHHT SSTTHHHHHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeeeeeebbeebeebbeebeeebeeeeeebeebbebbeebbebbeebeeebeeeeebeebebeebbeeeeeeebeebbeebbebbbebbeebbeebee:    

queryA      1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
                :****************************************************************************************************:
7cwt_A_1    1001:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1100
SecStr          :HHHHHHHHHHHHHHHHHHTTTS   STTTSSSSEEEEEEEEEETTEEEEEEEEEEE  EEEEEEES EESSSSEEEESSSEEEESSSS EEE SSS   E:    
ExpBur          :bbeebeebbeebbebbeebbbeebeeeebbeebebbbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeebebbbeeeebbbbbebbbbee:    

queryA      1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1147
                :**********************************:
7cwt_A_1    1101:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS:1134
SecStr          :E BGGGEEEES TTTSTT EE   B SHHHHH  :    
ExpBur          :ebbeeebeeeeebeeeeeeeeeebeeeeeeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123