Protein Model on 6zp0_A_1_C_1
(TEMPLATE: 
6zp0
)Protein Model on 6zp0_A_1_C_1
(TEMPLATE: 6zp0
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS2) | A 1 (A) | polymer(polypeptide(L)) [1030 aa] | Spike glycoprotein :SPIKE_SARS2 | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [1030 aa] | Spike glycoprotein :SPIKE_SARS2 | 317N 319R 355R 381G 382V 383S 386K 390L 396Y 463P 464F 465E 466R 468I 470T 471E 516E 519H 545G 547T 548G 549T 557K 559F 562F 563Q 564Q 565F 566G 567R 569I 570A 571D 588T 589P 592F 613Q 614D 646R 647A 665P 667G 668A 669G 670I 671C 697M 699L 700G 701A 702E 703N 704S 705V 706A 707Y 708S 709N 711S 712I 713A 715P 957Q 961T 965Q 968S 969N 970F 971G 987V 999G 1002Q 1003S 1006T 1009T 1010Q 1013I 1017E 1039R 1040V 1041D 1045K 1046G 1047Y 1072E 1074N 1077T 1079P 1089F 1090P 1094V 1107R 1121F 1123S 1124G 1129V 1141L 1145L (identity: 100.0 %/92.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6zp0_A_1 identity=92.2% |
queryA 27:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 126
:******************************************* ***********************************************:
6zp0_A_1 18:AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXXXXDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNV: 117
SecStr : EEE S B SSS SEEEEEEEEE TT EEEEEE ---------- EE S EEEEEEESS EEEEEEESS SSSS EEEEEE SS E:
ExpBur :eebebebbbbbbbeeeeeeeeeeebeebbbbbeeebbbbebee----------ebeebebeebbbbbbbbbbbbbbbbbbbeebebeebbbbbbeebeee:
queryA 127:VIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 226
:***************** **************************************************************************:
6zp0_A_1 118:VIKVCEFQFCNDPFLGVXXXXXXXXXMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPL: 217
SecStr :EEEEE EEEEEEE --------- EEEEE S EEEE S SS EEEEEEEEEETTEEEEEEEEEE SSS SS BEEE:
ExpBur :ebebbebebbeebbbbe---------eeeeeebeeeeeeeeeeeebeeeeeebeeeeeebebbbbbbbbeeeeebbbbbeeeebeeeebbbeeeebbeee:
queryA 227:VDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 326
:******************* *******************************************************************:
6zp0_A_1 218:VDLPIGINITRFQTLLALHXXXXXXXXXXXXXXAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESI: 317
SecStr :EEEE EEEEEE -------------- EEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHTSS SEEEEEEEEE SSEE:
ExpBur :eebebebebeebbbbbbee--------------ebebbbbbbebeeeebbbebeeebebeebbbbeeeebbebbbeeeebebeebeeebeebeeeeeeeb:
Contact : b b
queryA 327:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 426
:****************************************************************************************************:
6zp0_A_1 318:VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLP: 417
SecStr :EE B HHHHS S BGGG EEEEE SEE HHHHHHSTT SEEEEESS TTTTTT EES EEEEEEEEEGGGGGGSSTT SHHHHHT :
ExpBur :ebbbeeeeebebeebbeeeebebbeebeeeebbebbbebeebeeeeeeeeeebeebeeeebbeebbbebebbbbbbebebeebbbbeeeeebbbebbebb:
Contact : b bbb b b b
queryA 427:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 526
:****************************************************************************************************:
6zp0_A_1 418:DDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG: 517
SecStr :TT EEEEEEE TTTT TT B EEE SS TT EESSSS SS BTTEE SEEE B TTS GGGSEEEEEEEEE SSS EE :
ExpBur :eebebbbbbbebbeebbeeebbeebebbeeeeeebeeeeebeeeebeeeeeeebeeeeeeebeebbebbebeeeeeebebbbbbbbbbbeeeeeebbbbb:
Contact : bbbb b bb b b
queryA 527:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHA: 626
:********************************************************************************************** :
6zp0_A_1 518:PKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVXXXXXX: 617
SecStr :S SSEEEEEETTEEEEEEEEE TT EEE TTS EEEEE SSS EEEEE EEEEEEEE TTT EEEEET TTT ------:
ExpBur :eeeeeeeeeeebbebbbbeeeeebebeebeeebeeeebebeeeeeebebbbbeeeeebbbbeebeebbbbbbbbbeeebeebbbbeeebeeeee------:
Contact : b bbb b b bbbbbb bbb bb b bb
queryA 627:DQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 726
: ************************************ **************************************:
6zp0_A_1 618:XXXXXXXXXXXXXXNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXX----XXXXXXSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEI: 713
SecStr :-------------- EEEETTEEEES EE SS B SEEEETTEEEEEE ------------ EEEEEEB S TTEEEEEEEEEEEEEEEE:
ExpBur :--------------eebebebbbbeebeebeeeeeeebebeeebbbbbee------------eebbbbbeeeeeeeeeeeeeeeeeebbeebebebeeeb:
Contact : bb b bbbbb b bbbbbbbbbbb bbb b
queryA 727:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 826
:****************************************************************************************************:
6zp0_A_1 714:LPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKV: 813
SecStr :EE EEEE HHHHHTSS HHHHHHHGGGTTHHHHHHHHHHHHHHHHHHHHHHHH SS SS STT TTTS TTSSS HHHHHHHTT :
ExpBur :bbbbbebbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbbebbeebbebbeeebeeeeeeebeebebeebbeeeeeeeebbebbbbbbebb:
queryA 827:TLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 926
:* *************************************************************************:
6zp0_A_1 814:TXXXXXXXXXXXXXXXXXXXXXXXXXXKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQ: 913
SecStr : -------------------------- TTSEEEE SS HHHHHHHHHHHHHHHHHHTTHHHHSS HHHHHHHHHHTTT THHHHHTHHHHHHH:
ExpBur :e--------------------------eeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeebebbebbbebbeebebeeebbeeeeeebbeb:
queryA 927:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1026
:****************************************************************************************************:
6zp0_A_1 914:FNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAA:1013
SecStr :HHHHHHHHHHHHHH GGGGHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :beebbeebeeebeeeeeebeebbebbeebeebbeebeeebeeeeebebbebeebeeeeeeeebbebbeebbebbbebbeebbeebeebbeebeebbeebb:
Contact : b b b bbbb b b bb b bb b b
queryA 1027:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1126
:****************************************************************************************************:
6zp0_A_1 1014:TKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNC:1113
SecStr :HHHHHHTSS STTTTSSSEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSEEEEESSSEEEE SS EEEE TTS EE BTTTEEEEEET:
ExpBur :ebbeebbbbbbeeeebbbeeebbbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbebeebbbbbeeeebbbbbeebbbeeebbeeebeeeeeb:
Contact : bbb bbb b b b b bb b b b bb
queryA 1127:DVVIGIVNNTVYDPLQPELDS:1147
:*********************:
6zp0_A_1 1114:DVVIGIVNNTVYDPLQPELDS:1134
SecStr :TTSTT EE B TTHHHHH :
ExpBur :eeeeeeeeeebeeeeeeeeee:
Contact : b b b
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[assembly_id:1]
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