Protein Model on 6xr8_A_1_C_1
(TEMPLATE: 
6xr8
)Protein Model on 6xr8_A_1_C_1
(TEMPLATE: 6xr8
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS2) | A 1 (A) | polymer(polypeptide(L)) [1107 aa] | Spike glycoprotein :SPIKE_SARS2 | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [1107 aa] | Spike glycoprotein :SPIKE_SARS2 | 41K 42V 43F 47V 113K 115Q 132E 198D 199G 200Y 224E 225P 230P 231I 232G 234N 282N 365Y 366S 369Y 370N 373S 374F 375S 377F 384P 385T 413G 427D 735S 737D 740M 751N 754L 755Q 756Y 758S 759F 761T 762Q 765R 786K 787Q 788I 789Y 790K 792P 796D 797F 832G 833F 834I 835K 836Q 837Y 841L 842G 843D 846A 854K 855F 861L 862P 863P 864L 865L 866T 868E 869M 872Q 873Y 883T 886W 890A 892A 894L 895Q 896I 897P 898F 900M 904Y 907N 912T 913Q 914N 917Y 918E 920Q 921K 963V 964K 966L 967S 975S 976V 978N 979D 981L 982S 983R 984L 985D 988E 1002Q 1005Q 1009T 1012L 1013I 1019R 1030S 1031E 1034L 1035G 1039R 1111E 1141L 1144E 1148F 1152L 1155Y 1156F 1159H (identity: 100.0 %/96.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6xr8_A_1 identity=96.3% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
:******************************************************** *************************************:
6xr8_A_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr : EEEEESS B SSS SEEEEEEEEE TTEEEEEEEEE ------- EE EE S EEEEEEESSS EEEEEEESSSBSS:
ExpBur :eebebeeeeeeeeeebebebbbbbbbeeeebeeeeeebeebbbbbeeebebbebee-------ebbbbeebebeebbbbbbbbbeebbbbbbbbeebeee:
Contact : bbb b b
queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
:****************************************************************************************************:
6xr8_A_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr :S EEEEEE SS EEEEEE BEEEEEEEEEE S SSSS EEEEEEEES SEEEEEE SSEEEEEEEEEEEETTEEEEEEEEEEEEES:
ExpBur :eebbbbbebbebebbbbbebebbebbbbbbeeeeeeeeeebeeebbeeeeeeeeeeeebeeeeeebeeeeeebeebebbbbbeeeeebebbbeeeebeee:
Contact : b b bbb
queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
:******************************* ************************************************************:
6xr8_A_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALXXXXXXXXXSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr :SS BEEEEEE EEEEEEB --------- S SEEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHT SS SEEE:
ExpBur :eebbeeeebbeeeeebebebebeebbbbbbb---------eeeebebeebbbbbbebeeeebbbebeeebebeebbbbeeebbbbbbbeeeebebeeeee:
Contact : bb bbb b b
queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
:****************************************************************************************************:
6xr8_A_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr :EE B EEEEE SB HHHHHS SS BSTT EEEEE SEE GGGGTTT SEEEESSS GGGGGG EESSEEEEEEEEEGGGGGGGSSS:
ExpBur :ebeebeeeeeeebbbbbebeeebebeebbeeeebebbbebeeeebeebbbeeeebeeebeeeeeebeebeeeebeebbbbebebbbbbbebebbebbeee:
Contact : bb bb bbb b bb b
queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
:****************************************************************************************************:
6xr8_A_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr : SHHHHHT TT EEEEEEE HHHH TT B EEE SS TT EE SSS SS BTTEE SEEE B TTS TTTSEEEEEEE:
ExpBur :eeeebbbebbebbeebebbbbbbebbeebbeeebbeebebbeebeeebeeeeebeeeeeeeeeeeebeeeeeeebeebbeebbbeeebeebebbbbbbbb:
Contact : b
queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
:****************************************************************************************************:
6xr8_A_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr :EE SSS EE S SSEEEEEETTEE EEEEE TT EEE TT EEEEE SSS EEEEE SB EEEEE TTT S EEEET:
ExpBur :bbebeeeebebbbeeeeeebbeeebbebbbbbbeeebebeebeeebeeeebbbeeeeeeeebbbbbeeeebbebeebeebbbbbbbbbbeebeeebbbbb:
queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
:***** ******************************************** *************************:
6xr8_A_1 614:DVNCTXXXXXXXXXXXXXXWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr :T -------------- SS SSEEEETTEEEES EE SS SEEEETTEEEEEE ------------ EEEEEE TTEEE:
ExpBur :ebebe--------------eebeeeeeeebebeebbbbebeebeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeee:
queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
:****************************************************************************************************:
6xr8_A_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr :EES EEEEEEEEEEE EEEE HHHHHHTT HHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTT SS SS STT TTTSB TTSSS:
ExpBur :bbeebebebeeebbbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbeebbeebbbebeeeeeeeeeeebeebebebbbeeeeeeb:
Contact : b b b b bbb bb bb b bbbbb b bb
queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
:****************************************************************************************************:
6xr8_A_1 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr : BHHHHHHHHHS S STT SGGGSTHHHHH HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHHTTHHHHSS HHHHHHHHHHHTT T:
ExpBur :ebbebbebbbeebeeeeeeeeeeeeebeeeeeeeeebbebeeebbebeeeebeeeebbebbebbbbbbbebbeebeeeeeeebebbebbbebbeebebee:
Contact : bbbbbb bbb b bb bbbbbb bb bb b b b b bbbbb b b b bb
queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
:****************************************************************************************************:
6xr8_A_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr :HHHHTTHHHHHHHHHHHHHHHHHHHHH S TTHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :ebbeeeeeebbeebeebbeebbeebeeeeeebeebbebbeebeebbbebbeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbbebbeebee:
Contact :b bb bb bb bb bb bb bbbbb b b b b bb
queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
:****************************************************************************************************:
6xr8_A_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr :HHHHHHHHHHHHHHHHHHTTSS STTTTSSSEEEEEEEEEETTEEEEEEEEEEE EEEEE S EESSSS EEESSSEEEESSS EEEE TTS E:
ExpBur :bbeebeebbeebbebbeebbbbbbeeeebbeeeebbbbbbbbbbbbbbbbbbbbeeeeeeebebbebbbeeeebbebeebbbbbeeeebbbbbeebbeee:
Contact : b bb bb b b
queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSP:1162
:*************************************************:
6xr8_A_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSP:1162
SecStr :E BTTTEEE S TTTSTT EE B THHHHHHHHHHHHHHHHHHHH :
ExpBur :ebbeeebeeeeeeeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeee:
Contact : b b b b bb b
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[assembly_id:1]
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