Protein Model on 6xr8_A_1_B_1
(TEMPLATE: 
6xr8
)Protein Model on 6xr8_A_1_B_1
(TEMPLATE: 6xr8
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS2) | A 1 (A) | polymer(polypeptide(L)) [1107 aa] | Spike glycoprotein :SPIKE_SARS2 | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1107 aa] | Spike glycoprotein :SPIKE_SARS2 | 52Q 304K 314Q 316S 317N 355R 382V 383S 385T 386K 390L 396Y 403R 405D 408R 414Q 415T 416G 417K 420D 421Y 424K 426P 455L 462K 463P 464F 465E 466R 468I 469S 471E 503V 514S 517L 518L 519H 545G 546L 547T 549T 551V 556N 557K 558K 559F 560L 562F 563Q 565F 566G 567R 569I 570A 571D 574D 586D 588T 589P 590C 591S 592F 614D 616N 634R 646R 647A 648G 665P 667G 668A 669G 670I 671C 696T 697M 699L 700G 701A 702E 703N 704S 705V 707Y 708S 709N 711S 712I 713A 715P 957Q 961T 965Q 968S 969N 970F 971G 985D 986K 987V 1002Q 1003S 1006T 1009T 1010Q 1013I 1017E 1039R 1040V 1041D 1045K 1046G 1047Y 1072E 1074N 1077T 1078A 1079P 1089F 1090P 1094V 1107R 1121F 1123S 1128V 1130I 1141L 1145L 1148F 1149K 1152L 1156F 1159H 1160T (identity: 100.0 %/96.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6xr8_A_1 identity=96.3% |
queryA 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
:******************************************************** *************************************:
6xr8_A_1 14:QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHXXXXXXXKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSK: 113
SecStr : EEEEESS B SSS SEEEEEEEEE TTEEEEEEEEE ------- EE EE S EEEEEEESSS EEEEEEESSSBSS:
ExpBur :eebebeeeeeeeeeebebebbbbbbbeeeebeeeeeebeebbbbbeeebebbebee-------ebbbbeebebeebbbbbbbbbeebbbbbbbbeebeee:
Contact : b
queryA 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
:****************************************************************************************************:
6xr8_A_1 114:TQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLV: 213
SecStr :S EEEEEE SS EEEEEE BEEEEEEEEEE S SSSS EEEEEEEES SEEEEEE SSEEEEEEEEEEEETTEEEEEEEEEEEEES:
ExpBur :eebbbbbebbebebbbbbebebbebbbbbbeeeeeeeeeebeeebbeeeeeeeeeeeebeeeeeebeeeeeebeebebbbbbeeeeebebbbeeeebeee:
queryA 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
:******************************* ************************************************************:
6xr8_A_1 214:RDLPQGFSALEPLVDLPIGINITRFQTLLALXXXXXXXXXSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIY: 313
SecStr :SS BEEEEEE EEEEEEB --------- S SEEEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHT SS SEEE:
ExpBur :eebbeeeebbeeeeebebebebeebbbbbbb---------eeeebebeebbbbbbebeeeebbbebeeebebeebbbbeeebbbbbbbeeeebebeeeee:
Contact : b
queryA 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
:****************************************************************************************************:
6xr8_A_1 314:QTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG: 413
SecStr :EE B EEEEE SB HHHHHS SS BSTT EEEEE SEE GGGGTTT SEEEESSS GGGGGG EESSEEEEEEEEEGGGGGGGSSS:
ExpBur :ebeebeeeeeeebbbbbebeeebebeebbeeeebebbbebeeeebeebbbeeeebeeebeeeeeebeebeeeebeebbbbebebbbbbbebebbebbeee:
Contact :b bb b bb bb b b b b b
queryA 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
:****************************************************************************************************:
6xr8_A_1 414:QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVL: 513
SecStr : SHHHHHT TT EEEEEEE HHHH TT B EEE SS TT EE SSS SS BTTEE SEEE B TTS TTTSEEEEEEE:
ExpBur :eeeebbbebbebbeebebbbbbbebbeebbeeebbeebebbeebeeebeeeeebeeeeeeeeeeeebeeeeeeebeebbeebbbeeebeebebbbbbbbb:
Contact :bbbb bb b b b bbbbb bb b b
queryA 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
:****************************************************************************************************:
6xr8_A_1 514:SFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ: 613
SecStr :EE SSS EE S SSEEEEEETTEE EEEEE TT EEE TT EEEEE SSS EEEEE SB EEEEE TTT S EEEET:
ExpBur :bbebeeeebebbbeeeeeebbeeebbebbbbbbeeebebeebeeebeeeebbbeeeeeeeebbbbbeeeebbebeebeebbbbbbbbbbeebeeebbbbb:
Contact :b bbb bbb b b bbbbb bb bbb bbb b b bbbbb
queryA 614:DVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIA: 713
:***** ******************************************** *************************:
6xr8_A_1 614:DVNCTXXXXXXXXXXXXXXWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTXXXXXXXXXXXXSQSIIAYTMSLGAENSVAYSNNSIA: 713
SecStr :T -------------- SS SSEEEETTEEEES EE SS SEEEETTEEEEEE ------------ EEEEEE TTEEE:
ExpBur :ebebe--------------eebeeeeeeebebeebbbbebeebeeeeeeebebeeebbbbeee------------eeebbbbeeeeeeeeeeeeeeeeee:
Contact :b b b bbb b bbbbb bb bbbbbbb bbb bbb
queryA 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
:****************************************************************************************************:
6xr8_A_1 714:IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPS: 813
SecStr :EES EEEEEEEEEEE EEEE HHHHHHTT HHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTT SS SS STT TTTSB TTSSS:
ExpBur :bbeebebebeeebbbbbbbbbebebeebbbeebeebeebbeeeeeebeebeeebeebbebbeebbeebbbebeeeeeeeeeeebeebebebbbeeeeeeb:
Contact : b
queryA 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
:****************************************************************************************************:
6xr8_A_1 814:KRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQ: 913
SecStr : BHHHHHHHHHS S STT SGGGSTHHHHH HHHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHHTTHHHHSS HHHHHHHHHHHTT T:
ExpBur :ebbebbebbbeebeeeeeeeeeeeeebeeeeeeeeebbebeeebbebeeeebeeeebbebbebbbbbbbebbeebeeeeeeebebbebbbebbeebebee:
queryA 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
:****************************************************************************************************:
6xr8_A_1 914:NVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLI:1013
SecStr :HHHHTTHHHHHHHHHHHHHHHHHHHHH S TTHHHHHHHHHHHHHHHHHHHGGG TTSS S HHHHHTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :ebbeeeeeebbeebeebbeebbeebeeeeeebeebbebbeebeebbbebbeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbbebbeebee:
Contact : b b b bbbb bbb bb b bb b
queryA 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
:****************************************************************************************************:
6xr8_A_1 1014:RAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQ:1113
SecStr :HHHHHHHHHHHHHHHHHHTTSS STTTTSSSEEEEEEEEEETTEEEEEEEEEEE EEEEE S EESSSS EEESSSEEEESSS EEEE TTS E:
ExpBur :bbeebeebbeebbebbeebbbbbbeeeebbeeeebbbbbbbbbbbbbbbbbbbbeeeeeeebebbebbbeeeebbebeebbbbbeeeebbbbbeebbeee:
Contact : b bbb bbb b b bbb bb b b
queryA 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSP:1162
:*************************************************:
6xr8_A_1 1114:IITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSP:1162
SecStr :E BTTTEEE S TTTSTT EE B THHHHHHHHHHHHHHHHHHHH :
ExpBur :ebbeeebeeeeeeeeeeeeeeeebeeeeeeeeeeeeeeeeeeeeeeeee:
Contact : b b b b b b bb b b bb
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[assembly_id:1]
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