#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [921 aa] | nsp12 :U6BRU0_9ALPC | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [184 aa] | nsp8 :U6BRU0_9ALPC | 261L(I) 263K(E) 265Y(F) 267K(S) 270L 271L 273Y 324T 326F 328P 329L 330V(C) 332K 335V(I) 336D 338V 339P 340F(L) 341V 366L 371L 372L 375A(C) 379A 380M(L) 382A(I) 383A 384S 385G(S) 386N(P) 387L(A) 388L 389L(V) 391K(Q) 392R 396F 398V 400A 405V(M) 407F(N) 506F(L) 509W(F) 514L 517D(E) 518S 523D(E) (identity: 54.3 %/60.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8urb_A_1 identity=60.7% |
queryA 6:SFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFR: 105 : **** * ***** ** ** * ********* ** **** ** * * * **** * * ** ** * * *** **** : 8urb_A_1 5:AYLNRVRGSSAARLEPC-NGTDTQHVYRAFDIYNKDVACLGKFLKVNCVRLKNLDKHD----AFYVVKRCTKSAMEHEQSIYSRLEKCGAVAEHDFFTWK: 99 SecStr :HHHHHHT SS EEES-STTS EEEE EE SS EE SEEEE SEEEEEESSSSS---- EEEEEEE HHHHHHHHHHHHHHTTSSSB EEEEEEE: ExpBur :ebeeebebeeeeebeee-eeeebeeeebbbbeeeeebbbbbebeeeebbbbbbeeeeb----bbbbbbeeeeeebeebeebbeebeeeebbbebebbeee: queryA 106:IDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVL: 205 : * ** *** ** **** *** *** ** ** * *** * * * *** ** **** ** * * ** * ***** ***** : 8urb_A_1 100:DGRAIYGNVCRKDLTEYTMMDLCYALRNFDENNCDVLKSILIKVGACEESYFNNKVWFDPVENEDIHRVYALLGTIVSRAMLKCVKFCDAMVEQGIVGVV: 199 SecStr : SS EEEEEEEEEE SSBHHHHHHHHHS SSS HHHHHHHHHHTSS GGGGGSTTTT TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTEEEE : ExpBur :eeeeebbbbbbbebbebbbbbbbbbbbebbeeebeebeebbebeebbeeebbeeeebbbbbebeebbebbeebbebbbebbeebbebbebbeebbbebeb: queryA 206:TLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDL-TKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDD: 304 :********* ****** * * * **** ** * * * * * *** ***** ** ***** ****** * * : 8urb_A_1 200:TLDNQDLNGDFYDFGDFTCSIKGMGIPICTSYYSYMMPVMGMTNCLASECFVKSDIFGEDFKSYDLLEYDFTEHKTALFNKYFKYWGLQYHPNCVDCSDE: 299 SecStr : GGGBBSSS B S EE SSS EEE HHHHHHTHHHHHHTTTTGGG S S TTSTT SGGGG HHHHHHHHHHH TT S SSGGG SH: ExpBur :bbbbbbbebebbebeebeeeeebebebebebbbbbbbbbbbbbebbeeeeeeeeeeeeeebeeeeeeeeebeebbeebbeebbeebeeebebbbeebeee: Contact : bb b b b bb b queryA 305:RCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNN: 404 : ** ****** **** * * **** ** **** * **** ** * * * ******** *** *** ** * * ** ******* : 8urb_A_1 300:QCIVHCANFNTLFSTTIPITAFGPLCRKCWIDGVPLVTTAGYHFKQLGIVWNNDLNLHSSRLSINELLQFCSDPALLIASSPALVDQRTVCFSVAALGTG: 399 SecStr :HHHHHHHHHHHHHGGGS TTS B EEEEEETTEEEEEE EEEETTTEEEE S SEE S HHHHHHHHH HHHHHHTS TT SS TT : ExpBur :ebbbbbbbbbbbbbebbbeebbbebeeebebeeeebebbbbbbbbbbbbbebeeeeeeeeeeeebeebbbebbbbeeeeebeebebeebebbbebbeeee: Contact : b b bbb b bb bbbb b bb b bb bbbbbbbb bb b b b queryA 405:VAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGF: 504 : ****** *** **** *** *** ******** * ** * ****** ** ** * * * *** * **** * * * ** **** : 8urb_A_1 400:MTNQTVKPGHFNKEFYDFLLEQGFFSEGSELTLKHFFFAQKGDAAVKDFDYYRYNRPTVLDICQARVVYQIVQRYFDIYEGGCITAKEVVVTNLNKSAGY: 499 SecStr : B B EE HHHHHHHHHHTTT TT SS B B TBHHHHHHGGGGG HHHHHHHHHHHHHTTSSS GGG S SSS T: ExpBur :eeeeebeeeeebeebeebbeeeebbeeeeebeeebebeeeeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebeebebebeebeeeeeeeebbb: Contact :b b queryA 505:PFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKT: 604 :* ** *** *** * *** ** * ****** ** ** ******* * ***** *** **** ** *** **** **** ***** ****** **** : 8urb_A_1 500:PLNKFGKAGLYYESLSYEEQDELYAYTKRNILPTMTQLNLKYAISGKERARTVGGVSLLSTMTTRQYHQKHLKSIVNTRGASVVIGTTKFYGGWDNMLKN: 599 SecStr :TGGGT HHHHHHHS HHHHHHHHHHHTTS EEEEEE S BSSSS EEEE HHHHHHHHHHHHHHHHHHHH SSSB TT STTTHHHHHHHH: ExpBur :bbeeeeebbebbeebeeeebeebbebbeebbbbbbbebebeeebbeeeebebebbbbbbbbbbbebbbbebbebbeeeeebbbbebeebeebbbbebbee: Contact : b b b bb b queryA 605:VYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANV: 704 : **** ************ *** * * ******* ** ** ** **** * * * * ***** *************** *** ***: 8urb_A_1 600:LIDGVENPCLMGWDYPKCDRALPNMIRMISAMILGSKHTTCCSSTDRFFRLCNELAQVLTEVVYSNGGFYLKPGGTTSGDATTAYANSVFNIFQAVSANV: 699 SecStr :HHTT SSEEEEE TTHHHH HHHHHHHHHHHTTT SSSS HHHHHHHHHHHHHHTTS EEEETTEEEE SS TTSTTHHHHHHHHHHHHHHHHHH: ExpBur :bbeebeeebbbbbebbebebbbbbbbbbbbbbbbbebbeeebeeeeebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbeebebbebbbbbbbbbbbbbbbb: queryA 705:NALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETD: 804 :* *** * * * ** **** ** ** ** * * ************** *** * *** * ** ** *********** *** * *: 8urb_A_1 700:NKLLSVDSNVCHNLEVKQLQRKLYECCYRSTTVDDQFVVEYYGYLRKHFSMMILSDDGVVCYNNDYASLGYVADLNAFKAVLYYQNNVFMSASKCWIEPD: 799 SecStr :HHHTTS TTT HHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHT GGG EES : ExpBur :bebbbbebeebeeeebeebbeebbebbbeeeebeeebbeebbbbbeebbbbbbebeebbbbbbeebbeebbbbbbebbbbbbbbbbbbbbeeeebbebee: queryA 805:LTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYS: 904 : ************ * *********** ** **** **** ** ********** ** * ** ** * * * * *: 8urb_A_1 800:INKGPHEFCSQHTMQIVDKDGTYYLPYPDPSRILSAGVFVDDVVKTDAVVLLERYVSLAIDAYPLSKHENPEYKKVFYVLLDWVKHLYKTLNAGVLESFS: 899 SecStr :GGG S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSGGGGSGGG GGGTTTTSTTTGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eeebbeebeebebbeeeeeeeebbbbbbebbebbbbbbbbeeeeeeebeeebeebbebbbebbbbbebeeebbeebbebbbebbeebbeeebeeeeeeee: queryA 905:VMLTNDNTSRYWEPEFYEAMY: 925 :* * * * * ** **: 8urb_A_1 900:VTLLEDSTAKFWDESFYANMY: 920 SecStr : SSTTTTTTSHHHHHGGG: ExpBur :eeeeeeebeebbeeebbbebb: |