#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | F 1 (J) | polymer(polyribonucleotide) | Template | 408Q 496N 500K 501S 507N 511K 541Q 543N 557V 558A 559G 569R 577K 580A 590G 592S 594F 595Y 682S 683G 684D 685A 686T 687T 689Y 864I 914R 915Y 920F 924M (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7cyq_A_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 7cyq_A_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHHS SS EEESSBTTB EEEEEEEESSS EEEEEEEE SEEEEEEE STT EEEEEEEEEE HHHHHHHHHHHHHHTT TTB EEEEE: ExpBur :eeebbeebbeeeeeebeeeeeeeeeeebebbebeeeeebbbbbbbebeebbbbbbeeeeeeeeebbbbbbeeeeebbeebeebbeebeebebbbebebbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 7cyq_A_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr :EESSS EEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGGSSSTT SSS TTHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTEEE: ExpBur :beeeeeeebbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbbeeeebbebbbebbeebbebbeebbebbebbeeebbeb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 7cyq_A_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E GGGBBSS B TT EE STT EEE HHHHHHHHHHHHHTTGGGGGSBTTS TTS B TT HHHHHHHHHHH TT S SSGGG S: ExpBur :ebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbebbeebbeebbebbeeebbbbbeebee: queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 7cyq_A_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :HHHHHHHHHHHHHHTTSS GGG S EEEEEETTEEEEEE EEEETTTEEEE S SEES HHHHHHHHS HHHHHHTSEE TT S EEEESSS: ExpBur :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeeeeebbbebbbbebeeeeeebebeebebebbbbeee: queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 7cyq_A_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B EE HHHHHHHHHTT S TT S B B GGGHHHHHGGGGG HHHHHHHHHHHHHTT S TTS S S S : ExpBur :eeeeeebeeeeebeebeebbeeeebbeeeeebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbbbbbeebebbebebeebebeeeeeebb: Contact : b b bb queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 7cyq_A_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :TTGGGT HHHHHHHS HHHHHHHHHHTTSS EEEEEE BSS EEEEE HHHHHHHHHHHHHHHHHHTT SSSSB TT STTTHHHHHHH: ExpBur :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeeebebebebbbbbbbbbebbbbebbebbeeeeebbbbbebebeebbbbebbe: Contact : b b b b bbb b b b b b bb queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 7cyq_A_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHTSS SSEEEEE TTTTTS HHHHHHHHHHHTTT TTTS HHHHHHHHHHHHHHHTS EEEETTEEEE SS TTSTTHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeeebbbbebeebbbbbbbbbbbbbbbbbbbbbeeebeeeeebbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebbebbbbbbbbbbbbbbb: Contact : bbbbbb b queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 7cyq_A_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHTS GGG HHHHHHHHHHHHHHHT S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHTTTSS HHHHHHHHHHHHS TTS EEES: ExpBur :bbbbbbbebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbeee: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 7cyq_A_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 SecStr : TTS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESTTTSS GGG THHHHHHHHHTSGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHHS : ExpBur :ebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeebeebbebbeebbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeeeeee: Contact : b queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :**************************: 7cyq_A_1 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :S S GGGGSTHHHHGGGSS : ExpBur :eeeeeeeeeeeeeeeeebeebbeeee: Contact : bb b b |