Protein Model on 8h16_A_1_R_1 (TEMPLATE: 8h16 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) A 1 (B) polymer(polypeptide(L)) [966 aa] Spike glycoprotein :SPIKE_SARS
2 b R 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 832I (identity: 100.0 %/88.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8h16_A_1 identity=88.4%
queryA        31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
                :****************************************       *****************************************    ******* :
8h16_A_1      21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINXXXXVVIRACNX: 120
SecStr          : EEEE SEEEE  SS    S EEEEEEEE  TTEEEEEE -------   EE SSEEEEEEEESS  EEEEEEESSSSSSS EEEEE ---- EEE   -:    
ExpBur          :eebebbebbbbbbeeeeeeeeeeebeebbbbbebebebee-------eeebebeebbbbbbbbeeeebebbbbbbeeeeebebbebee----eebeeee-:    

queryA       131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
                :                                ****             ***************************************************:
8h16_A_1     121:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr          :-------------------------------- EE ------------- EEEEEEEEEETTEEEEEEEEEE  S SS     EEEEEEEEEE      E:    
ExpBur          :--------------------------------eeee-------------ebbebbbbbeeeeebbbbebeeebeeeeebeeeebbbeeeeebebeeebee:    

queryA       231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
                :******             *********************************************************************************:
8h16_A_1     221:FRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr          :EEEEE ------------- EEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHT S   SEEEEEEEEEB    EEEE  S   B  HHHHHS:    
ExpBur          :bebeee-------------ebbbbbebeebebbbebeeebebeebbbbebebbbbbbbeeeeeebeebeeebeebebeeeeebbbbeebeeebebeebbe:    

queryA       331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
                :*************************************************************************************************** :
8h16_A_1     321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDX: 420
SecStr          : S   BGGG EEEEE SBB   HHHHSSS  SEEEEESS GGGGGT EES EEEEEEEE GGGGGG STT  SHHHHHT    TT  EEEEEEE TTT -:    
ExpBur          :eeebebbeebeeeebeebbbebbebeeeeebeeeebeebebeebeeebbbbbebbbbbbebebbebbbeeeeeebbbebbebbeebebbbbbbebeeee-:    

queryA       431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
                :       ******************                     *******      *****************************************:
8h16_A_1     421:XXXXXXXYKYRYLRHGKLRPFERDIXXXXXXXXXXXXXXXXXXXXXPLNDYGFXXXXXXGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr          :------- EEE   SS   TT    --------------------- EEE   ------    EEEEEEEE  SSS   EE          SS EEEEET:    
ExpBur          :-------eebbeeeeeebeeeeeee---------------------eeeebee------eeeebbbbbbbbeebeeebbbbbeeeeeebeeeebbebbbb:    

queryA       531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
                :****************************************************************************************************:
8h16_A_1     521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr          :TEEEEEEEEE      TT  EEE TTS EEEEE TTT  EEEEE   EEEEEEEES TTT S  EEEEET  HHHHHHHHHTT BSS  SS    S EEE:    
ExpBur          :eeeeebebeeeeeebeeeebeeeeeeeeeebbbbeeeeebbebeebeebbbbbbbbbeeeeeebbbbbeebebeebeebbeeeebebebeeeebeeeeee:    

queryA       631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
                :********************************        ************************************************************:
8h16_A_1     621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr          : SSEEEES EE SS    SEEEETTEEEEEE --------  EEEEEE   S        TTEEEEEEEEEEEEEEEEEE    EEEE HHHHHTTT HH:    
ExpBur          :bebbbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:    

queryA       731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
                :********************************************************************************      *******       :
8h16_A_1     721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLXXXXXXKQYGECLXXXXXXX: 820
SecStr          :HHHHHGGG S HHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE TTTS  TTSS  S HHHHHHHHH   ------  S    -------:    
ExpBur          :beebbeeeeebbeebeeebeebbebbeebbeebbeebeeeeeeeeebebeebebeebbbeeeeeeeebebbbbbbeebee------eebbeee-------:    

queryA       831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
                : ***************************************************************************************************:
8h16_A_1     821:XICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr          :-     TT EEEE  SS HHHHHHHHHHHHHHHHHTTTHHHHSS     HHHHHHHHHHHTT  HHHHHHTHHHHHHHHHHHHHHHHHHHHS   TTHHH:    
ExpBur          :-eeeeeebbbebeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebbebbeebbeebeeeeeebeeb:    
Contact         : b                                                                                                  

queryA       931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
                :****************************************************************************************************:
8h16_A_1     921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr          :HHHHHHHHHHHHHHHHTTS  TTSS SSHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS   STTTS SSEE:    
ExpBur          :eebbeebeebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbebbeeeebbbeeeb:    

queryA      1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
                :*********************************************************************************************:
8h16_A_1    1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr          :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEE SSSEEEE SSS   B  BTTTEEE S TTSSTT EE   B   :    
ExpBur          :bbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebebbbeebbeeeebbeeebeeeeebeeeeeeeeeebeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123