Protein Model on 8h16_A_1_B_1
(TEMPLATE: 
8h16
)Protein Model on 8h16_A_1_B_1
(TEMPLATE: 8h16
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | A 1 (B) | polymer(polypeptide(L)) [966 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | B 1 (A) | polymer(polypeptide(L)) [805 aa] | Spike glycoprotein :SPIKE_SARS | 42Y 45E 46I 47F 51T 217K 218P 269N 271T 719D 721N 737Q 738Y 739G 740S 744Q 747R 769Q 770M 771Y 772K 779F 818Q 822C 823L 835Q 836K 837F 841T 843L 845P 846L 848T 851M 855Y 865T 868W 872A 875A 876L 877Q 878I 879P 880F 882M 886Y 896N 899Y 900E 945V 948L 976D 984Q 987Q 994L 1001R 1012S 1013E 1021R 1100D (identity: 100.0 %/88.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h16_A_1 identity=88.4% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** ***************************************** ******* :
8h16_A_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINXXXXVVIRACNX: 120
SecStr : EEEE SEEEE SS S EEEEEEEE TTEEEEEE ------- EE SSEEEEEEEESS EEEEEEESSSSSSS EEEEE ---- EEE -:
ExpBur :eebebbebbbbbbeeeeeeeeeeebeebbbbbebebebee-------eeebebeebbbbbbbbeeeebebbbbbbeeeeebebbebee----eebeeee-:
Contact : b bbb b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
: **** ***************************************************:
8h16_A_1 121:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr :-------------------------------- EE ------------- EEEEEEEEEETTEEEEEEEEEE S SS EEEEEEEEEE E:
ExpBur :--------------------------------eeee-------------ebbebbbbbeeeeebbbbebeeebeeeeebeeeebbbeeeeebebeeebee:
Contact : bb
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:****** *********************************************************************************:
8h16_A_1 221:FRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEEE ------------- EEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHT S SEEEEEEEEEB EEEE S B HHHHHS:
ExpBur :bebeee-------------ebbbbbebeebebbbebeeebebeebbbbebebbbbbbbeeeeeebeebeeebeebebeeeeebbbbeebeeebebeebbe:
Contact : b b
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*************************************************************************************************** :
8h16_A_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDX: 420
SecStr : S BGGG EEEEE SBB HHHHSSS SEEEEESS GGGGGT EES EEEEEEEE GGGGGG STT SHHHHHT TT EEEEEEE TTT -:
ExpBur :eeebebbeebeeeebeebbbebbebeeeeebeeeebeebebeebeeebbbbbebbbbbbebebbebbbeeeeeebbbebbebbeebebbbbbbebeeee-:
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
: ****************** ******* *****************************************:
8h16_A_1 421:XXXXXXXYKYRYLRHGKLRPFERDIXXXXXXXXXXXXXXXXXXXXXPLNDYGFXXXXXXGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr :------- EEE SS TT --------------------- EEE ------ EEEEEEEE SSS EE SS EEEEET:
ExpBur :-------eebbeeeeeebeeeeeee---------------------eeeebee------eeeebbbbbbbbeebeeebbbbbeeeeeebeeeebbebbbb:
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:****************************************************************************************************:
8h16_A_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr :TEEEEEEEEE TT EEE TTS EEEEE TTT EEEEE EEEEEEEES TTT S EEEEET HHHHHHHHHTT BSS SS S EEE:
ExpBur :eeeeebebeeeeeebeeeebeeeeeeeeeebbbbeeeeebbebeebeebbbbbbbbbeeeeeebbbbbeebebeebeebbeeeebebebeeeebeeeeee:
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ************************************************************:
8h16_A_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SSEEEES EE SS SEEEETTEEEEEE -------- EEEEEE S TTEEEEEEEEEEEEEEEEEE EEEE HHHHHTTT HH:
ExpBur :bebbbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:
Contact : b b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:******************************************************************************** ******* :
8h16_A_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLXXXXXXKQYGECLXXXXXXX: 820
SecStr :HHHHHGGG S HHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE TTTS TTSS S HHHHHHHHH ------ S -------:
ExpBur :beebbeeeeebbeebeeebeebbebbeebbeebbeebeeeeeeeeebebeebebeebbbeeeeeeeebebbbbbbeebee------eebbeee-------:
Contact : bbbb b b bbbb b b bb
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
: ***************************************************************************************************:
8h16_A_1 821:XICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr :- TT EEEE SS HHHHHHHHHHHHHHHHHTTTHHHHSS HHHHHHHHHHHTT HHHHHHTHHHHHHHHHHHHHHHHHHHHS TTHHH:
ExpBur :-eeeeeebbbebeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebbebbeebbeebeeeeeebeeb:
Contact : bbb b b bb b b b b b b bbbbbb b b b bb
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:****************************************************************************************************:
8h16_A_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHTTS TTSS SSHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS STTTS SSEE:
ExpBur :eebbeebeebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbebbeeeebbbeeeb:
Contact : b b b b b b b bb b
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
:*********************************************************************************************:
8h16_A_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEE SSSEEEE SSS B BTTTEEE S TTSSTT EE B :
ExpBur :bbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebebbbeebbeeeebbeeebeeeeebeeeeeeeeeebeeee:
Contact : b
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[assembly_id:1]
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