Protein Model on 8h15_B_1_U_1 (TEMPLATE: 8h15 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) B 1 (B) polymer(polypeptide(L)) [958 aa] Spike glycoprotein :SPIKE_SARS
2 b U 1 (C) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 544R (identity: 100.0 %/87.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8h15_B_1 identity=87.8%
queryA        31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
                :****************************************       ****************  ***********************************:
8h15_B_1      21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEXXNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr          : EEEE S  EE SSS    S EEEEEEEE  TTEEEEEE -------   EE SSEEEEEE  --    EEEEESSSSTTS EEEEEEETTEEEEEEE  :    
ExpBur          :eebebbebbbbeeeeeebeeeeeebeebbbbbebebebee-------eeebebeebbbbbbbe--eebebbbbbbebeeebebbebbeeeeeebbebbbb:    

queryA       131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
                :**                      ************             ************************    ***********************:
8h15_B_1     121:ELXXXXXXXXXXXXXXXXXXXXXXNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIXXXXDLPSGFNTLKPIFKLPLGINITN: 220
SecStr          :  ----------------------   SEEEEEEE ------------- EEEEEEEEEETTEEEEEEEEEE ----    S  EEEEEEEE       E:    
ExpBur          :ee----------------------eeeeeeeeeeee-------------eebbbbbbbeeeeebebbebeeee----ebeeeeebbeeeeebebebebee:    

queryA       231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
                :*****              *********************************************************************************:
8h15_B_1     221:FRAILXXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr          :EEEE --------------  EEE   EEEEEEEEE SSS EEEEEETTSSHHHHHHHHTT S   EEEEEEEEEEB     EEE     SB   HHHHS:    
ExpBur          :bebbe--------------ebbbbbebeebebbbebeeeeebeebbbbebebbbbbbbeeeebebeebeeebeebebeeeeebbbbbebeeebebeebbe:    

queryA       331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
                :***********************************************************************************************     :
8h15_B_1     321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTXXXXX: 420
SecStr          : S   BGGG EEEEE SBB   TTTSSSS  SEEEEESS GGGGGT EES EEEEEEEE STTSTT SSS  SSHHHHT    TT  EEEEEEE -----:    
ExpBur          :eeebeebeebeeeebeebbbebbebeeeeebeeeebbebebeebbeebbbbbebbbbebeeebeebbbeeeeeebbbebbebbeebebbbbbbee-----:    

queryA       431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
                :        *****************                                    ***************************************:
8h15_B_1     421:XXXXXXXXKYRYLRHGKLRPFERDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr          :--------      SS   TT    ------------------------------------  EEEEEEEE  SSS   EE S        SS B EEET:    
ExpBur          :--------eeeeeeeeebeeeeeee------------------------------------eebebbbbbbeeeeeebebbbeeeeeeeeeeebbebbbb:    

queryA       531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
                :****************************************************************************************************:
8h15_B_1     521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr          :TEE  BEEEE      TT  B   TTS   EEE TTT  EEEEE   EEEEEEEEE TTT S  EEEEET  SHHHHHHHHTT BSS  SS    S EEE:    
ExpBur          :eeeeebbbeebeeebeeeebebeeeeeeebbbbbeeeeebbebeebeebbbbbbbbbbeebeebbbbbeebebeebbebeeeeebebebeeeebeeeeee:    
Contact         :             b                                                                                      

queryA       631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
                :********************************        ************************************************************:
8h15_B_1     621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr          : SSEEEES EE S     SEEEETTEEEEEE --------  EEEEEE            SSEEE    EEEEEEEEEEE    EEEE HHHHTT S SH:    
ExpBur          :bebbbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:    

queryA       731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
                :********************************************************************************      *******       :
8h15_B_1     721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLXXXXXXKQYGECLXXXXXXX: 820
SecStr          :HHHHHGGG SSHHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE TTTS  TTSSSSS HHHHHHHHHS  ------  S    -------:    
ExpBur          :beebbeeeeebbeebeeebeebbebbeebbeebbeebeeeeeeeeebebebbebeebbbeeeeeeeebebbebbbebbee------eebbeee-------:    

queryA       831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
                : ***************************************************************************************************:
8h15_B_1     821:XICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr          :-     TT EEEE  SS HHHHHHHHHHHHHHHHHT SSTTSSS     HHHHHHHHHHHTT  THHHHHSHHHHHHHHHHHHHHHHHHHHTT    HHH:    
ExpBur          :-eeeeeebbbebeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebeebbeebeeebeeeeeebeeb:    

queryA       931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
                :****************************************************************************************************:
8h15_B_1     921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr          :HHHHHHHHHHHHHHHHTTS  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS   STTSSSSSEE:    
ExpBur          :eebbeebeebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbeebeeeebbbeeeb:    

queryA      1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYD:1121
                :*******************************************************************************************:
8h15_B_1    1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYD:1111
SecStr          :EEEEEEEETTEEEEEEEEEEE    EEEEES EESSS EEEESSSEEEE SSSEEEE TTS   B   SSSEEE S TTSSTT EE     :    
ExpBur          :bbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebbbbbeebbeeeebbeeebeeeeebeeeeeeeeeebee:

Input Residue Numbers for Focused Sites

ex) 2,15,123