Protein Model on 8h15_B_1_C_1
(TEMPLATE: 
8h15
)Protein Model on 8h15_B_1_C_1
(TEMPLATE: 8h15
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | B 1 (B) | polymer(polypeptide(L)) [958 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [962 aa] | Spike glycoprotein :SPIKE_SARS | 301Q 304N 306R 368G 369V 370S 372T 373K 377L 450P 451F 452E 453R 455I 503L 505N 533T 535T 543K 544R 545F 546Q 548F 549Q 550Q 551F 552G 553R 555V 556S 557D 558F 575P 577S 578F 600D 601V 632Q 651P 654A 655G 681L 683A 684D 685S 687I 688A 689Y 690S 691N 693T 694I 695A 697P 939Q 943T 947Q 950S 951N 952F 953G 988T 991T 995I 999E 1021R 1022V 1023D 1028G 1054E 1056N 1059T 1061P 1071F 1076V 1089R 1103F 1105S 1110V 1112I (identity: 100.0 %/87.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h15_B_1 identity=87.8% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** **************** ***********************************:
8h15_B_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEXXNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr : EEEE S EE SSS S EEEEEEEE TTEEEEEE ------- EE SSEEEEEE -- EEEEESSSSTTS EEEEEEETTEEEEEEE :
ExpBur :eebebbebbbbeeeeeebeeeeeebeebbbbbebebebee-------eeebebeebbbbbbbe--eebebbbbbbebeeebebbebbeeeeeebbebbbb:
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:** ************ ************************ ***********************:
8h15_B_1 121:ELXXXXXXXXXXXXXXXXXXXXXXNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIXXXXDLPSGFNTLKPIFKLPLGINITN: 220
SecStr : ---------------------- SEEEEEEE ------------- EEEEEEEEEETTEEEEEEEEEE ---- S EEEEEEEE E:
ExpBur :ee----------------------eeeeeeeeeeee-------------eebbbbbbbeeeeebebbebeeee----ebeeeeebbeeeeebebebebee:
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:***** *********************************************************************************:
8h15_B_1 221:FRAILXXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEE -------------- EEE EEEEEEEEE SSS EEEEEETTSSHHHHHHHHTT S EEEEEEEEEEB EEE SB HHHHS:
ExpBur :bebbe--------------ebbbbbebeebebbbebeeeeebeebbbbebebbbbbbbeeeebebeebeeebeebebeeeeebbbbbebeeebebeebbe:
Contact : b b b
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*********************************************************************************************** :
8h15_B_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTXXXXX: 420
SecStr : S BGGG EEEEE SBB TTTSSSS SEEEEESS GGGGGT EES EEEEEEEE STTSTT SSS SSHHHHT TT EEEEEEE -----:
ExpBur :eeebeebeebeeeebeebbbebbebeeeeebeeeebbebebeebbeebbbbbebbbbebeeebeebbbeeeeeebbbebbebbeebebbbbbbee-----:
Contact : bbb bb b
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
: ***************** ***************************************:
8h15_B_1 421:XXXXXXXXKYRYLRHGKLRPFERDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr :-------- SS TT ------------------------------------ EEEEEEEE SSS EE S SS B EEET:
ExpBur :--------eeeeeeeeebeeeeeee------------------------------------eebebbbbbbeeeeeebebbbeeeeeeeeeeebbebbbb:
Contact : bbbb b b b
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:****************************************************************************************************:
8h15_B_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr :TEE BEEEE TT B TTS EEE TTT EEEEE EEEEEEEEE TTT S EEEEET SHHHHHHHHTT BSS SS S EEE:
ExpBur :eeeeebbbeebeeebeeeebebeeeeeeebbbbbeeeeebbebeebeebbbbbbbbbbeebeebbbbbeebebeebbebeeeeebebebeeeebeeeeee:
Contact : b b bbbb bbbbbb bbbb b bb bb
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ************************************************************:
8h15_B_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SSEEEES EE S SEEEETTEEEEEE -------- EEEEEE SSEEE EEEEEEEEEEE EEEE HHHHTT S SH:
ExpBur :bebbbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:
Contact : b b bb b bbb bbbbb bbb b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:******************************************************************************** ******* :
8h15_B_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLXXXXXXKQYGECLXXXXXXX: 820
SecStr :HHHHHGGG SSHHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE TTTS TTSSSSS HHHHHHHHHS ------ S -------:
ExpBur :beebbeeeeebbeebeeebeebbebbeebbeebbeebeeeeeeeeebebebbebeebbbeeeeeeeebebbebbbebbee------eebbeee-------:
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
: ***************************************************************************************************:
8h15_B_1 821:XICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr :- TT EEEE SS HHHHHHHHHHHHHHHHHT SSTTSSS HHHHHHHHHHHTT THHHHHSHHHHHHHHHHHHHHHHHHHHTT HHH:
ExpBur :-eeeeeebbbebeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebeebbeebeeebeeeeeebeeb:
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:****************************************************************************************************:
8h15_B_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHTTS TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :eebbeebeebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbeebeeeebbbeeeb:
Contact : b b b bbbb b b b b bbb b
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYD:1121
:*******************************************************************************************:
8h15_B_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYD:1111
SecStr :EEEEEEEETTEEEEEEEEEEE EEEEES EESSS EEEESSSEEEE SSSEEEE TTS B SSSEEE S TTSSTT EE :
ExpBur :bbbbbbbbeebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebbbbbeebbeeeebbeeebeeeeebeeeeeeeeeebee:
Contact : b b b b b b b b b b b
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[assembly_id:1]
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