Protein Model on 8h12_C_1_N_1 (TEMPLATE: 8h12 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) C 1 (C) polymer(polypeptide(L)) [1008 aa] Spike glycoprotein :SPIKE_SARS
2 b N 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 442Y 475Y (identity: 100.0 %/92.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8h12_C_1 identity=92.0%
queryA        31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
                :****************************************       *****************************************************:
8h12_C_1      17:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 116
SecStr          : EEEE S  EE SSS    S EEEEEEEE  TTEEEEEE -------   EE SS EEEEEEESS  EEEEEEESSSSSSS EEEEEE SS EEEEEE  :    
ExpBur          :eebebbebbbbbbeeeebeeeeeebeeebbbbebebebee-------eeebebeebbbbbbbbeeeebebbbbbeebeeeeebbebeeeeeeebbebbbb:    

queryA       131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
                :**                      ************             ***************************************************:
8h12_C_1     117:ELXXXXXXXXXXXXXXXXXXXXXXNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 216
SecStr          :  ----------------------   S  EEEEE ------------- EEEEEEEEEETTEEEEEEEEE   S SS      EEEEEEEE   S   E:    
ExpBur          :ee----------------------eeeeeeeeeeee-------------eebebbbbbeeeeebbbbebeeebeeeeebeeeeeebeeeeebebebebee:    

queryA       231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
                :******             *********************************************************************************:
8h12_C_1     217:FRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 316
SecStr          :EEEEE ------------- EEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHTSS   SEEEE    S     EEEE  S   B  HHHHHS:    
ExpBur          :bebeee-------------ebbbbbebeebbbbbebeeebebeebbbbbbebbbbbbbeeeebebeebeeebeeebbeeeeebbbbbebeeebebeebbe:    

queryA       331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
                :********************************************************************* ******************************:
8h12_C_1     317:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPCQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 416
SecStr          : S    GGG EEEEE SSB    SSTTT   SEEEEESS GGGSSS B S EEEEEEEE GGGGGGSSSS  SHHHHHT    TT  EEEEEEE  TTT :    
ExpBur          :eeebbbbeebeeeebeebbbebeebeeebeeeeeebeebeeeebeebbbbbbebbbbbbbbebbebbbbeeeeebbbebbbbbeebebbbbbbebeeebb:    

queryA       431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
                :****************************************************************************************************:
8h12_C_1     417:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 516
SecStr          : SS B   EEE   SS   TT        B TTS    TTSSS B SEEE  B SSS GGGS EEEEEEE    SS    B          SS BEEEES:    
ExpBur          :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebbbeeeeeeeebbbbbbbbbbeeeeeebebbbeeeeeeeeeeebbebbbb:    
Contact         :           b                                b                                                       

queryA       531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
                :****************************************************************************************************:
8h12_C_1     517:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 616
SecStr          :S B  BEEEE      SS  EE  TTS   EEE TTT  EEEEE SS S EEEEES TTT S  EEEEET  TTSHHHHHTGGGS TTTSSSSSSS EEE:    
ExpBur          :eeeeebbbeeeeeebeeeebebeeeeeebebbbbbeeeebbebeebeeeebbbbbbbeeeeeebbbbbeebebeebeeebbbeebeeebeebbeeeeebe:    

queryA       631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
                :********************************         ***********************************************************:
8h12_C_1     617:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 716
SecStr          :ETTEEEES EE SS    SEE SSSEEEEEE --------- EEEEEE   S        TT EEEEEEEEEEEEEEEEE    EEEE HHHHHSTT HH:    
ExpBur          :beebbbbebeeeeeeeeeebebeeebbbbeee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:    

queryA       731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
                :******************************************************************************                     *:
8h12_C_1     717:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVXXXXXXXXXXXXXXXXXXXXXD: 816
SecStr          :HHHHHTTSTTSSHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE TTTS  SSSS SS HHHHHHSS  --------------------- :    
ExpBur          :bbebbeeeeeebeebeeebeebbebbbebbeebbeebeeeeeebeebebebbebeebbbeeeeeeeebebbebbbebe---------------------e:    

queryA       831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
                :****************************************************************************************************:
8h12_C_1     817:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 916
SecStr          : SHHHHTTTEEEE  SS HHHHHHHHHHHHHHHHHB STTSSSS  B  HHHHHHHHHHTTT  HHHHHHTHHHHHHHHHHHHHHHHHHHTT   SSHHH:    
ExpBur          :eeeebeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebbebbeebbeebbeebeeeeeebeeb:    

queryA       931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
                :************************************** *************************************************************:
8h12_C_1     917:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKCEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1016
SecStr          :HHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS   STTSSSSSEE:    
ExpBur          :eebeeebeeebeebbeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbbbbeeeebbbeeeb:    

queryA      1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
                :*********************************************************************************************:
8h12_C_1    1017:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1109
SecStr          :EEEEEEEETTEEEEEEEEEEEEEEEEE   S EESSSEEEEESSSEEEE SSSEEEE SSS   EE BTTTEEEEEETTSSTT EE   B   :    
ExpBur          :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbebeebbbbeeeeebebbbebbbbeeebbeeebeeeeebeeeeeeeeeebeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123