Protein Model on 8h12_B_1_U_1 (TEMPLATE: 8h12 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) B 1 (B) polymer(polypeptide(L)) [1007 aa] Spike glycoprotein :SPIKE_SARS
2 b U 1 (B) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 1055R 1080N 1081G 1085F (identity: 100.0 %/91.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8h12_B_1 identity=91.9%
queryA        31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
                :****************************************       *****************************************************:
8h12_B_1      17:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 116
SecStr          : EEEE S  B  SSS    S EEEEEEEE  TTEEEEEE -------   EE SS EEEEEEESS  EEEEEEESSSSSSS EEE  B SS B   EE  :    
ExpBur          :eebebbebbbbbbeeeebeeeeeebeebbbbbebebebee-------eeebebeebbbbbbbbeeeebebbbbbbebeeeeebbbbeeeeeeebbebbbb:    

queryA       131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
                :**                      ************             ***************************************************:
8h12_B_1     117:ELXXXXXXXXXXXXXXXXXXXXXXNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 216
SecStr          :  ----------------------   S  B   B ------------- EEEEEEEEEETTEEEEEEEEE   S SS      B EEEEEE       E:    
ExpBur          :ee----------------------eeeeeeeeeeee-------------ebbebbbbbeeeeebbbbebebebeeeeebeeeeeebeeeeebebebebee:    

queryA       231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
                :******             *********************************************************************************:
8h12_B_1     217:FRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 316
SecStr          :EEEEE ------------- EEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHTSS   SEEEE    S     EEEE  S   B  HHHHSS:    
ExpBur          :bebeee-------------ebbbbbebeebbbbbebeeebebeebbbbbbebbbbbbbeeeeeebeebeeebeeebbeeeeebbbbeebeeebebeebbe:    

queryA       331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
                :********************************************************************* ******************************:
8h12_B_1     317:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPCQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 416
SecStr          : S    GGG EEEEE SSB   STTTTT   SEEEEESS GGGSSS B S EEEEEEEE GGGGGGSSSS  SSHHHHT    TT  EEEEEEE  TTT :    
ExpBur          :eeebbbbeebeeeebeebbbebeebeeebeeeeeebeebeeeebeebbbbbbebbbbbbbbebbebbbbeeeeebbbebbbbbeebebbbbbbebeeebb:    

queryA       431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
                :****************************************************************************************************:
8h12_B_1     417:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 516
SecStr          : SS BTT EEE   SS   TT        B TTS    TTSTT B SEEE  B SSS GGGS EEEEEEE    SS    B          SS BEEEES:    
ExpBur          :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebbbeeeeeeeebbbbbbbbbbeeeeeeeebbbeeeeeeeeeeebbebbbb:    

queryA       531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
                :****************************************************************************************************:
8h12_B_1     517:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 616
SecStr          :S B  BEEEE      TT  EE  SSS   EEE TTT  EEEEE SS S EEEEES TTT S  EEEEET  GGGHHHHHTGGGS TTTGGGTSSS EEE:    
ExpBur          :eeeeebbbeeeeeebeeebbbbeeeeeebebbbbbeeeebbebeebeeeebbbbbbbeeeeeebbbbbeeeebeebeeebbbeebeebbeebbeeeeebe:    

queryA       631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
                :********************************         ***********************************************************:
8h12_B_1     617:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 716
SecStr          :ETTEEEES EE SS B  SEEEETTEEEEEE --------- EEEEEEB  S        TT EEEEEEEEEEEEEEEEE    EEEE HHHHHSTT HH:    
ExpBur          :beebbbbebeeeeeeeeeebebeeebbbbeee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:    

queryA       731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
                :******************************************************************************                      :
8h12_B_1     717:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVXXXXXXXXXXXXXXXXXXXXXX: 816
SecStr          :HHHHHTTSTTSSHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE TTSS  SSSS SS HHHHHHTS  ----------------------:    
ExpBur          :bbebbeeeeeebeebeeebeebbebbbebbeebbeebeeeeeeeeebebeebebeebbbeeeeeeeebebbebbbebe----------------------:    

queryA       831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
                :****************************************************************************************************:
8h12_B_1     817:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 916
SecStr          : HHHHHTTTEEEE  SS HHHHHHHHHHHHHHHHHB SSSSSSS  B  HHHHHHHHHHTTT  THHHHHTHHHHHHHHHHHHHHHHHHHHH S TTHHH:    
ExpBur          :eeeebeeebbeeeeeeeeeeebbeebbbbbbbbbebbeebeeeeeeeeebeebbbebbeebebeeebbeeeeeebbebbeebbeebbeebeeeeeebeeb:    

queryA       931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
                :************************************** *************************************************************:
8h12_B_1     917:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKCEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1016
SecStr          :HHHHHHHHHHHHHHHHTTS  TTSS S HHHHTTSS TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS   STTSSSSSEE:    
ExpBur          :eebeeebeeebeebbeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbbbbeeeebbbeeeb:    

queryA      1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
                :*********************************************************************************************:
8h12_B_1    1017:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1109
SecStr          :EEEEEEEETTEEEEEEEEEEEEEEEEE   S EESSS EEEESSSEEEE SS EEEE SSS   B  BSTTEEE S TTSSTT EE   B   :    
ExpBur          :bbbbbbbbbebbbbbbbbbeeeeeeebebbebbbeeeebbebeebbbbeeeeebebbbebbbeeeebbeeebeeeeeeeeeeeeeeeebeeee:    
Contact         :                        b                        bb   b

Input Residue Numbers for Focused Sites

ex) 2,15,123