Protein Model on 8h12_A_1_Y_1 (TEMPLATE: 8h12 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) A 1 (A) polymer(polypeptide(L)) [1007 aa] Spike glycoprotein :SPIKE_SARS
2 b Y 1 (B) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 544R (identity: 100.0 %/91.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8h12_A_1 identity=91.9%
queryA        31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
                :****************************************       *****************************************************:
8h12_A_1      17:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 116
SecStr          : EEEE S  EE  SS    S EEEEEEEE  TTEEEEEE -------   EE SS EEEEEEESS  EEEEEEESSSSSSS EEEEEE SS EEEEEE  :    
ExpBur          :eebebbebbbbbbeeeebeeeeeebeeebbbbebebebee-------eeebebeebbbbbbbbeeeebebbbbbbebeeeeebbebeeeeeeebbebbbb:    

queryA       131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
                :**                      ************             ***************************************************:
8h12_A_1     117:ELXXXXXXXXXXXXXXXXXXXXXXNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 216
SecStr          :  ----------------------   S   B  B ------------- EEEEEEEEEETTEEEEEEEEEE  S SS      EEEEEEEE   S   E:    
ExpBur          :ee----------------------eeeeeeeeeeee-------------eebebbbbbeeeeebbbbebeeeeeeeeebeeeebebeeeeebebebebee:    

queryA       231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
                :******             *********************************************************************************:
8h12_A_1     217:FRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 316
SecStr          :EEEEE ------------- EEEEEE EEEEEEEEE TTS EEEEEETTS HHHHHHHHHTSS   SEEEE    S     EEEE  S   B  HHHHTS:    
ExpBur          :bebeee-------------ebbbbbebeebbbbbebeeebebeebbbbbbebbbbbbbeeeeeebeebeeebeeebbeeeeebbbbeebeeebebeebbe:    

queryA       331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
                :********************************************************************* ******************************:
8h12_A_1     317:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPCQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 416
SecStr          : S    GGG EEEEE SBB   SSSTTT   SEEEEESS GGGSSS B S EEEEEEEE GGGGGGSSSS  SSHHHHT    TT  EEEEEEE  SSS :    
ExpBur          :eeebebbeebeeeebeebbbebeebeeebeeeeeebeebeeeebeebbbbbbebbbbbbbbebbebbbeeeeeebbbebbbbbeebebbbbbbebeeebb:    

queryA       431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
                :****************************************************************************************************:
8h12_A_1     417:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 516
SecStr          : SS B   EE    SS   TT        B TTSS   TTSSS B S EE  B SSS GGGS EEEEEEE    SS   BB          SS BEEEES:    
ExpBur          :eeeebeebebbeeeeeebeeeeeeeeeeebbeeeeeeeeeeeebeebbeebbbeeeeeeeebbbbbbbbbbeeeeeeeebbbeeeeeeeeeeebbebbbb:    

queryA       531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
                :****************************************************************************************************:
8h12_A_1     517:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 616
SecStr          :S B  BEEEE      TT  B   TTS   EEE TTT  EEEEE SS SEEEEEES TTT S  EEEEET  TTSHHHHHTGGGS TTTGGGSSSS EEE:    
ExpBur          :beeeebbbeeeeeebeeebbbbeeeeeeeebbbbbeeeebbebeebeeebbbbbbbbeeeeeebbbbbeeeebeebeeebbbeebeeebeebbeeeeebe:    
Contact         :             b                                                                                      

queryA       631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
                :********************************         ***********************************************************:
8h12_A_1     617:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXXKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 716
SecStr          :ETTEEEES EE SS B  SEEEETTEEEEEE --------- EEEEEEB           TT EEEEEEEEEEEEEEEEE    EEEE HHHHHSTT HH:    
ExpBur          :beebbbbebeebeeeeeeebebeeebbbbbee---------eebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:    

queryA       731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
                :******************************************************************************                      :
8h12_A_1     717:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVXXXXXXXXXXXXXXXXXXXXXX: 816
SecStr          :HHHHHTTSTTSSHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE TTSS  SSSS SS HHHHHHTT  ----------------------:    
ExpBur          :bbebbeeeeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebebeebebeebbbeeeeeeebbebbebbbebe----------------------:    

queryA       831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
                :****************************************************************************************************:
8h12_A_1     817:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 916
SecStr          : HHHHHTTTEEEE  SS HHHHTTTHHHHHHHHTTT STTSSSS     HHHHHHHHHHTTT  THHHHHTHHHHHHHHHHHHHHHHHHHHH  SSSHHH:    
ExpBur          :eeeebeeebbeeeeeebeeeebbeebbbbbbbbbebbeebeeeeeeeeebbebbbebbeebebeeebbeeeeeebbebbeebbeebbeebeeeeeebeeb:    

queryA       931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
                :************************************** *************************************************************:
8h12_A_1     917:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKCEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1016
SecStr          :HHHHHHHHHHHHHHHHTTS  TTSS S HHHHHHSS TTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS    TTSSSSSEE:    
ExpBur          :eebeeebeeebeebbeebeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbbbbeeeebbbeeeb:    

queryA      1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
                :*********************************************************************************************:
8h12_A_1    1017:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1109
SecStr          :EEEEEEEETTEEEEEEEEEEEEEEEEE  BS EESSSEEEEESSSEEEE SSSEEEE TTS   B  BSTTEEEEEETTSSTT EE   B   :    
ExpBur          :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebbbbbeebbeeeebbeeebeeeeeeeeeeebeeeebeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123