Protein Model on 8h11_C_1_IA_1 (TEMPLATE: 8h11 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) C 1 (C) polymer(polypeptide(L)) [974 aa] Spike glycoprotein :SPIKE_SARS
2 b IA 1 (C) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 317P 318N 565P 566K (identity: 100.0 %/88.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8h11_C_1 identity=88.9%
queryA        31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
                :****************************************       *****************************************************:
8h11_C_1      21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr          : EEEETT  EE  SS    SSEEEEEEEE  TTEEEEEE -------   EE SS EEEEEEESSS EEEEE  SSSSSSS EEEEEE SS EEEEEEEE:    
ExpBur          :eebebbebbbbbeeeeebeeeeeebebebbbbebebebee-------eeebebeebbbbbbbbeeeebebbbbbbebeeeeebbebeeeeeeebbebbbb:    

queryA       131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
                :****                    ************             ***************************************************:
8h11_C_1     121:ELCDXXXXXXXXXXXXXXXXXXXXNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr          :    -------------------- EEEEEEEEEE ------------- EEEEEEEEEETTEEEEEEEEEE   SSS      EEEEEEEE       E:    
ExpBur          :eeee--------------------eeeeeeeeeeee-------------eebbbbbbbeeeeebbbbebeeebeeeeebbeeeebbeeeeebebebebee:    

queryA       231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
                :******             *********************************************************************************:
8h11_C_1     221:FRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr          :EEEEE ------------- EEEEEE EEEEEEEEE SSS EEEEEETTS HHHHHHHHHTSS   SEEEEEEEEEB    EEEE         HHHHHS:    
ExpBur          :bebeee-------------ebbbbbbbeebebbbebeeeeebeebbbbebebbbbbbbeeeebebeebeeebeebebeeeeebbbbeeeeeebebeebbe:    
Contact         :                                                                                      bb            

queryA       331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
                :*************************************** *********************************************************** :
8h11_C_1     321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDX: 420
SecStr          : S   BGGG EEEEE SEE   HHHHS S  SEEEEESS GGGGGT  BS EEEEEEEE GGGGGGSSSS  SHHHHHT    TT  EEEEEEE  S  -:    
ExpBur          :eeebbbbebbeeeebeebebebbebeeeeebeeeebeebebeebbeebbbbbebbbbbbebebbebbbeeeeeebbbebbbbbeebebbbbbbebeeee-:    

queryA       431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
                :       ******************                     *******      *****************************************:
8h11_C_1     421:XXXXXXXYKYRYLRHGKLRPFERDIXXXXXXXXXXXXXXXXXXXXXPLNDYGFXXXXXXGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr          :------- EEE   SS   TT    --------------------- EEE   ------    EEEEEEEE  SSSS  EE S        SSEEEEEET:    
ExpBur          :-------eebbeeeeeebeeeeeee---------------------eeeebee------eeebbbbbbbbbeeeeeebbbbbeeeeeeeeeeebbebbbb:    

queryA       531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
                :****************************************************************************************************:
8h11_C_1     521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr          :TEEEEEEEEE      TT  B   TTS   EEE TTT  EEEEE   EEEEEEEES TTT S  EEEEES  HHHHHHHHHTT BSS  SS    S EEE:    
ExpBur          :eeeeebebeeeeeebeeeeeebeeeeeeeebbbbeeeeebbebeebeebbbbbbbbbbeebeebbbbbeebebeebeebbeeeebebebeeeebeeeeee:    
Contact         :                                  bb                                                                

queryA       631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
                :********************************        ************************************************************:
8h11_C_1     621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr          : SSEEEES EE S     SEEEETTEEEEEE --------  EEEEEE   S        SSEEEEEEEEEEEEEEEEEE    EEEE HHHHHTTT HH:    
ExpBur          :beebbbbebeeeeeeeeeebebeeebbbbbee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:    

queryA       731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
                :********************************************************************************                    :
8h11_C_1     721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLXXXXXXXXXXXXXXXXXXXX: 820
SecStr          :HHHHHGGG SSHHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE GGGS  SSSSSSS HHHHHHHHS   --------------------:    
ExpBur          :beebbeeeeeebeebeeebeebbeebbebbeebbeebeeeeeeeeebebebbebeebbbeeeeeeeebebbbbbbeebee--------------------:    

queryA       831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
                :   *************************************************************************************************:
8h11_C_1     821:XXXAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr          :---   TT EEEE  SS HHHHHHHHHHHHHHHHHHTTTTTTSS     HHHHHHHHHHHTT  HHHHHTSHHHHHHHHHHHHHHHHHHTTS  STTHHH:    
ExpBur          :---eeeebbeeeeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebeebbeebeeebeeeeeebeeb:    

queryA       931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
                :************************************ ***************************************************************:
8h11_C_1     921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr          :HHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS   STTSSSSSEE:    
ExpBur          :eebbeebeebeeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbeebeeeebbbeeeb:    

queryA      1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
                :*********************************************************************************************:
8h11_C_1    1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr          :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSS EEEESSSEEEE SS EEEEETTEEEEE  BSTTEEE S TTS TT EE   B   :    
ExpBur          :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebbbbbeebbeeeebbeeebeeeeeeeeeeeeeeeebeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123