Protein Model on 8h11_A_1_GA_1 (TEMPLATE: 8h11 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(SPIKE_SARS) A 1 (B) polymer(polypeptide(L)) [992 aa] Spike glycoprotein :SPIKE_SARS
2 b GA 1 (C) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 444R 447K 448L 449R (identity: 100.0 %/90.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8h11_A_1 identity=90.6%
queryA        31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
                :****************************************       *****************************************************:
8h11_A_1      21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr          : EEEETT  EE  SS    SEEEEEEEEE  TTEEEEEE -------   EE SS EEEEEEESS  EEEEE  SSSSTTS EEEEEEETTEEEEEEEEE:    
ExpBur          :eebebbebbbbbbeeeebeeeeeebeebbbbbebebebee-------eeebebeebbbbbbbbeeeebebbbbbbebeeeeebbebeeeeeeebbebbbb:    

queryA       131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
                :*****                   ************             ***************************************************:
8h11_A_1     121:ELCDNXXXXXXXXXXXXXXXXXXXNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr          :     ------------------- EEEEEEEEEE ------------- EEEEEEEEEETTEEEEEEEEE     SS      EEEEEEEE       E:    
ExpBur          :eeeee-------------------eeeeeeeeeeee-------------ebbebbbbbeeeeebbbbebeeebeeeeebeeeebbbeeeeebebeeebee:    

queryA       231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
                :******             *********************************************************************************:
8h11_A_1     221:FRAILTXXXXXXXXXXXXXAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr          :EEEEE ------------- EEEEEE EEEEEEEEE SSS EEEEEETTS HHHHHHHHHT S   SEEEEEEEEEB    EEEE          HHHHS:    
ExpBur          :bebeee-------------ebbbbbebeebebbbebeeebebeebbbbebebbbbbbbeeeeeebeebeeebeebebeeeeebbbbeeeeeebebeebbe:    

queryA       331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
                :*************************************** *********************************************************** :
8h11_A_1     321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDX: 420
SecStr          : S   BSSS EEEEE SEE   HHHHS TT SEEEEESS STTTTT  BS EEEEEEEE STTTTSSSTT  SHHHHHT    TT  EEEEEEE TTT -:    
ExpBur          :eeebebbebbeeeebeebebebbebeeeeebeeeebeeeebeebbeebbbbbebbbbbbebebeebbbbeeeeebbbebbebbeebebbbbbbebeeee-:    

queryA       431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
                :       ******************                     *******      *****************************************:
8h11_A_1     421:XXXXXXXYKYRYLRHGKLRPFERDIXXXXXXXXXXXXXXXXXXXXXPLNDYGFXXXXXXGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr          :------- EEE   SS   TT    --------------------- EEE   ------    EEEEEEEE  SSSS  EE S        SSEEEEEET:    
ExpBur          :-------eebbeeeeeebeeeeebe---------------------eeeebee------eeebbbbbbbbbeeeeeebbbbbeeeeeeeeeeebbebbbb:    
Contact         :             b  bbb                                                                                 

queryA       531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
                :****************************************************************************************************:
8h11_A_1     521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr          :TEEEEEEEEE      TT  EEE TTS EEEEE TTT  EEEEE   EEEEEEEES TTT S  EEEEET  HHHHHHHHHTT BSS  SS    S EEE:    
ExpBur          :eeeeebebeeeeeebeeeebebeeeeeeeebbbbeeeeebbebeebeebbbbbbbbbeeeeeebbbbbeebebeebeebbeeeebebebeeeebeeeeee:    

queryA       631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
                :********************************        ************************************************************:
8h11_A_1     621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr          : SSEEEES EE SS    SEEEETTEEEEEE --------  EEEEEE   S        SSEEEEEEEEEEEEEEEEEE    EEEE HHHHHTTT SH:    
ExpBur          :bebbbbbebeeeeeeeeeebebeeebbbbbee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbbbbebebeebbbeebee:    

queryA       731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
                :********************************************************************************      **************:
8h11_A_1     721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLXXXXXXKQYGECLGDINARD: 820
SecStr          :HHHHHGGG SSHHHHHHHHHHHHHHHHHHHHHHH   SS     S  EETTEE GGGS  SSSSSSS HHHHHHHHHS  ------        BTTTTB:    
ExpBur          :beebbeeeeebbeebeeebeebbebbbebbeebbeebeeeeeeeeebebeebebeebbeeeeeeeeebebbbbbbeebee------eeebeeeeeeeeee:    

queryA       831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
                :****************************************************************************************************:
8h11_A_1     821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr          :      TT EEEE  SS HHHHHHHHHHHHHHHHHHTTGGGSSS     HHHHHHHHHHHTT  HHHHHTSHHHHHHHHHHHHHHHHHHTTS   TTHHH:    
ExpBur          :eeeeeeebbbeeeeeebeeeebbeebbbbbbbbbebbebbeeeeeeeeebbebbbebbeebebeeebbeeeeeebbeebbebbeebeeebeeeeeebeeb:    

queryA       931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
                :************************************ ***************************************************************:
8h11_A_1     921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr          :HHHHHHHHHHHHHHHHGGG  TTSS S HHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS   STTSSSSSEE:    
ExpBur          :eebbeebbebbeebeeeeeeeeebebeebeebeeeeeeeebeebbeebbebbbebbeebbeebeeebeebeeebeebbebbeebbbeebeeeebbbeeeb:    

queryA      1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1123
                :*********************************************************************************************:
8h11_A_1    1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPL:1113
SecStr          :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSSSEEEESSSEEEE SSSEEEE SSS   EE BSTTEEE S TTSSTT EE   B   :    
ExpBur          :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebbbbbeebbeeeebbeeebeeeeebeeeeeeeeeebeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123