Protein Model on 8h10_C_1_B_1
(TEMPLATE: 
8h10
)Protein Model on 8h10_C_1_B_1
(TEMPLATE: 8h10
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(SPIKE_SARS) | C 1 (C) | polymer(polypeptide(L)) [1026 aa] | Spike glycoprotein :SPIKE_SARS | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [1026 aa] | Spike glycoprotein :SPIKE_SARS | 45E 47F 110K 112Q 158N 189N 191D 192G 193F 223P 225G 226I 227N 269N 270G 352Y 353S 356Y 360F 361F 362S 364F 371A 372T 375N 414D 489I 717S 722M 727D 729T 733N 736L 737Q 738Y 739G 740S 741F 744Q 768K 769Q 770M 771Y 772K 779F 844P 845P 846L 847L 848T 851M 855Y 865T 866A 868W 872A 875A 876L 877Q 878I 879P 880F 882M 886Y 895Q 896N 899Y 900E 948L 949S 957S 958V 960N 961D 963L 964S 965R 966L 967D(C) 976D 987Q 994L 1001R 1012S 1013E 1021R (identity: 98.8 %/93.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8h10_C_1 identity=93.5% |
queryA 31:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 130
:**************************************** *****************************************************:
8h10_C_1 21:TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHXXXXXXXNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNF: 120
SecStr : EEEE S EE SEEEEEEEEE TTEEEEEE ------- EE SS EEEEEEESS EEEEEEESSSSTTS EEEEEE SS EEEEEE :
ExpBur :eebebbebbbbbeeeeeeeeeeeebeeebbebeeebebee-------eeebebeebbbbbbbbeeeebebbbbbbebeeebebbbbbeeeeeebbebbbb:
Contact : b b b b
queryA 131:ELCDNPFFAVSKPMGTQTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 230
:******** **************** ***************************************************:
8h10_C_1 121:ELCDNPFFXXXXXXXXXXXXMIFDNAFNCTFEYISDXXXXXXXXXXXXXKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITN: 220
SecStr : B SS ------------ BS S EEEEE ------------- EEEEEEEEEETTEEEEEEEEE S SS EEEEEEEE E:
ExpBur :eeeeebee------------ebeeeeeeeeeeeeee-------------ebbebbbbbeeeeebbbbebeeebeeeeebeeeeebbeeeeebebebebee:
Contact : b b bbb b bbb
queryA 231:FRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 330
:******* **********************************************************************************:
8h10_C_1 221:FRAILTAXXXXXXXXXXXAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCPFGEVFN: 320
SecStr :EEEEE ----------- EEEEEE EEEEEEEEE TTS EEEEEETTT HHHHHHHHHTSS SEEEE S EEEE B HHHHHS:
ExpBur :bbbbbee-----------eebbbbbebeebbbbbebbeeeebeebbbbbbebbbbbbbeeeeeebeebeeebeeebeeeeeebbbbeeeeeebebeebbe:
Contact : bb
queryA 331:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 430
:*************************************** ************************************************************:
8h10_C_1 321:ATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVCATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDA: 420
SecStr : S BSTT EEEEE SEE GGGTT SEEEEESS GGGSSS BSEEEEEEEEE GGGGGGSSTT SHHHHHT SS EEEEEEE HHHH :
ExpBur :eeebbbbbebeeeebeebbbeeeebeeeeeeeeeeeeebeeeebeebbbbebebbbbbbbbebbebbbeeeeeebbbebbebbeebebbbbbbebeeebb:
Contact : bb b bbb b bb b b
queryA 431:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 530
:****************************************************************************************************:
8h10_C_1 421:TSTGNYNYKYRYLRHGKLRPFERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFN: 520
SecStr : SS BTT EEE SS TT B TTSS TTSSS B SEEE B SSS GGGS EEEEEEEEE SSS EE SS BEEEET:
ExpBur :eeebbeebebbeeeeeebeeeeeeeeeeebbeeeeebeeeeeebeebbeebebeeeeeebebbbbbbbebbeeeeeebebbbeeeeeebeeeebbebbbb:
Contact : b
queryA 531:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 630
:****************************************************************************************************:
8h10_C_1 521:GLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNNVFQ: 620
SecStr :TEE BEEEE TT EEE TTS EEEEE TTT EEEEE S S EEEEES TTT EEEEET GGGHHHHHTGGGS HHHHTTTSSS EEE:
ExpBur :bbeeebbbeeeeeebeeeebbeeeeeeebebbbbeeeeebbebeebeeeebbbbbbbeeeeeebbbbbbebebeebeeebbbeebeeebeebbeeeeeee:
queryA 631:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 730
:******************************** ************************************************************:
8h10_C_1 621:TQAGCLIGAEHVDTSYECDIPIGAGICASYHTXXXXXXXXQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTE: 720
SecStr : SSEEEES EE SS SEEEETTEEEEEE -------- EEEEEE TTEEEEEEEEEEEEEEEEEE EEEE HHHHHSTT HH:
ExpBur :beebbbbebeeeeeeeeeebebeeebbbbeee--------eeebbbbeeeeeeeeeeeeeeeeeebbeebebebeeebbbbbbebbebebeebbbeebee:
Contact : b b b b
queryA 731:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARD: 830
:********************************************************************************* *:
8h10_C_1 721:CANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLAXXXXXXXXXXXXXXXXXXD: 820
SecStr :HHHHHHTSTTSTHHHHHHHHHHHHHHHHHHHHHH SS S EETTEE GGGS SSSS SS HHHHHHTTSS ------------------ :
ExpBur :beebbeeeeeebeebeeebeebbebbeebbeebbeebeeeeeeeeebebebbebeebbeeeeeeeeebebbebbbeebeee------------------e:
Contact : b bbbbbb b bbbbb b
queryA 831:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 930
:****************************************************************************************************:
8h10_C_1 821:LICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKAISQIQESLTTTSTALGKL: 920
SecStr : HHHHHHTTEEEE SS HHHHHHHHHHHHHHHHHT SSSSSSS HHHHHHHHHHTTT HHHHHHTHHHHHHHHHHHHHHHHHHHHS TTHHH:
ExpBur :eeeebeeebbeeeeeeeeeeebbeebbbbbbbbbebbebbeeeeeeeeebeebbbebbeebebeeebbeeeeeebbeebeebbeebeeebeeeeeebeeb:
Contact : bbbbb b b bb b b bbbbbb b b bb bb
queryA 931:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1030
:************************************ ***************************************************************:
8h10_C_1 921:QDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLCKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYH:1020
SecStr :HHHHHHHHHHHHHHHHGGG TTSS S HHHHSSSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS STTSSSSSEE:
ExpBur :eebbeebeebbeebeeebeeeeebeeeebeebeeeeeeeebeebbeebbebbbebbeebbeebeebbeebeeebeebbebbeebbbeebeeeebbbeeeb:
Contact : bb bb bb bbbbb b b b b bb b
queryA 1031:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQP:1125
:***********************************************************************************************:
8h10_C_1 1021:LMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQP:1115
SecStr :EEEEEEEETTEEEEEEEEEEEEEEEEEEEES EESSS EEEESSSEEEE SSSEEEE SSS EE BSTTEEE S TTSSTT EE B S :
ExpBur :bbbbbbbbbebbbbbbbbbeeeeeeebeebebbbeeeebbeeeebbbbeeeeebebbbebbeeeeebbeeebeeeeeeeeeeeeeeeebeeeeee:
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[assembly_id:1]
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